RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 EIF4EBP1Q13541 118 aaPredicted RBP5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 C6orf15Q6UXA7 325 aaPredicted RBP5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 SSX8Q7RTT4 187 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 SPATA12Q7Z6I5 190 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 LHFPL4Q7Z7J7 247 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 GGNQ86UU5 652 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 RPS19BP1Q86WX3 136 aaKnown RBP5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 KIR3DL3Q8N743 410 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 C5orf17Q8NAS9 161 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 NUP35Q8NFH5 326 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 OR52E5Q8NH55 327 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 FAM216AQ8WUB2 273 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 SARAFQ96BY9 339 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 POM121L2Q96KW2 1035 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 FAM234AQ9H0X4 552 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 WDR54Q9H977 334 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 OCIAD1Q9NX40 245 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 HSPB8Q9UJY1 196 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 PSG11Q9UQ72 335 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 LSM4Q9Y4Z0 139 aaKnown RBP5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 OR51B2Q9Y5P1 312 aa5.3□□□□□ -1.56
SRGAP2-211ENST00000604423 HCFC1P51610 2035 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 CHD7Q9P2D1 2997 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 CNTRLQ7Z7A1 2325 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 TRGV8A0A0C4DH27 118 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 A0A1B0GV72 72 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 A0A1W2PRE2 83 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 LINC00473A8K010 186 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 GGTLC3B5MD39 225 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 K7EP34 96 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 CYC1P08574 325 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 OR5AL1P0C617 328 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 MYF5P13349 255 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 IGFBP2P18065 325 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 APOBEC3AP31941 199 aaPredicted RBP5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 UQCRFS1P47985 274 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 HBBP68871 147 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 PCOLCEQ15113 449 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 TRAT1Q6PIZ9 186 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 TCF24Q7RTU0 167 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 ABHD12Q8N2K0 398 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 TSTD1Q8NFU3 115 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 OR1N2Q8NGR9 330 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 NABP2Q9BQ15 211 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 FNDC4Q9H6D8 234 aaPredicted RBP5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 SH3BGRL2Q9UJC5 107 aa5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 TIMM8BQ9Y5J9 83 aaPredicted RBP5.29□□□□□ -1.56
SRGAP2-211ENST00000604423 IGHV3-43A0A0B4J1X8 118 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 IGHV1OR15-9A0A0B4J2B8 117 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 A0A1W2PR77 199 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 FAM231BA6NCW3 169 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 HIGD1CA8MV81 97 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 PRSS46E5RG02 174 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 SMPD2O60906 423 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 SS18L1O75177 396 aaPredicted RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 IGLV2-8P01709 118 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 IGHV3-43DP0DP04 118 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 VDAC2P45880 294 aaPredicted RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 CEBPDP49716 269 aaPredicted RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 PLP1P60201 277 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 UBE2L3P68036 154 aaKnown RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 AESQ08117 197 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 ZNF146Q15072 292 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 TMEM97Q5BJF2 176 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 LYSMD4Q5XG99 296 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 Q6ZS52 159 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 FAM231DQ6ZW35 169 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 OR5A1Q8NGJ0 315 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 TMEM186Q96B77 213 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 SNRNP40Q96DI7 357 aaKnown RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 CDX2Q99626 313 aaPredicted RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 ABI3Q9P2A4 366 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 TCF19Q9Y242 345 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 ASCC3Q8N3C0 2202 aaKnown RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 ASXL3Q9C0F0 2248 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 RANBP2P49792 3224 aaKnown RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 USF3Q68DE3 2245 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 C9orf118A6NHY6 69 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 SH2D7A6NKC9 451 aaPredicted RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 C21orf140B9A014 251 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 H3BRM9 83 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 SPINT2O43291 252 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 GNG7O60262 68 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 COX8AP10176 69 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 SCGB1A1P11684 91 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 GDF1P27539 372 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 HOXC12P31275 282 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 FABP6P51161 128 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 FOXA3P55318 350 aaPredicted RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 NXPH1P58417 271 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 BRWD1-AS2P59051 145 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 B3GALT5-AS1P59052 145 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 NHLH1Q02575 133 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 MRPL49Q13405 166 aaKnown RBP5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 LTC4SQ16873 150 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 FAM120AOSQ5T036 256 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 SLC35E4Q6ICL7 350 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 C16orf54Q6UWD8 224 aa5.28□□□□□ -1.56
SRGAP2-211ENST00000604423 OR10AG1Q8NH19 301 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms