RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 PRNDQ9UKY0 176 aa12.2□□□□□ -0.46
CCDC12-210ENST00000604181 SSR3Q9UNL2 185 aa12.2□□□□□ -0.46
CCDC12-210ENST00000604181 ELOA3CA0A087WX78 387 aaPredicted RBP12.19□□□□□ -0.46
CCDC12-210ENST00000604181 A0A0A6YYH2 397 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 A6NJ64 397 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 ST8SIA3O43173 380 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 IGKV1-39P01597 117 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 PMP2P02689 132 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 IGKV1D-39P04432 117 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 C4BPBP20851 252 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 GABARAPL2P60520 117 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 TMEM56Q96MV1 263 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 CMTM3Q96MX0 182 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 SCRT1Q9BWW7 348 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 HRH4Q9H3N8 390 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 ZFAND3Q9H8U3 227 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 ANAPC10Q9UM13 185 aa12.19□□□□□ -0.46
CCDC12-210ENST00000604181 IGHV4-4A0A075B6R2 117 aa12.18□□□□□ -0.46
CCDC12-210ENST00000604181 SCAND1P57086 179 aa12.18□□□□□ -0.46
CCDC12-210ENST00000604181 PINX1Q96BK5 328 aaKnown RBP12.18□□□□□ -0.46
CCDC12-210ENST00000604181 SEC22AQ96IW7 307 aa12.18□□□□□ -0.46
CCDC12-210ENST00000604181 TXN2Q99757 166 aa12.18□□□□□ -0.46
CCDC12-210ENST00000604181 CELA1Q9UNI1 258 aa12.18□□□□□ -0.46
CCDC12-210ENST00000604181 X6R8D5 127 aa12.18□□□□□ -0.46
CCDC12-210ENST00000604181 A0A1B0GU03 582 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 C11orf94C9JXX5 98 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 DNASE2O00115 360 aaPredicted RBP12.17□□□□□ -0.46
CCDC12-210ENST00000604181 GNG7O60262 68 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 CBX5P45973 191 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 PAFAH1B2P68402 229 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 IZUMO4Q1ZYL8 232 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 PHLDA2Q53GA4 152 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 SPINK9Q5DT21 86 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 TRPT1Q86TN4 253 aaKnown RBP12.17□□□□□ -0.46
CCDC12-210ENST00000604181 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 IFT46Q9NQC8 304 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 DIABLOQ9NR28 239 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
CCDC12-210ENST00000604181 PUS1Q9Y606 427 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC12-210ENST00000604181 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 ZNF705EA8MWA4 302 aaPredicted RBP12.16□□□□□ -0.46
CCDC12-210ENST00000604181 GPR31O00270 319 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 RTL8CO15255 209 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 PRCDQ00LT1 54 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 LINC00336Q6ZUF6 198 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 ZNF767PQ75MW2 155 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 STHQ8IWL8 128 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 TSPAN14Q8NG11 270 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 BORCS5Q969J3 196 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 CLEC5AQ9NY25 188 aa12.16□□□□□ -0.46
CCDC12-210ENST00000604181 MRPL36Q9P0J6 103 aaKnown RBP12.16□□□□□ -0.46
CCDC12-210ENST00000604181 LOC100506127A0A0U1RQW1 187 aa12.15□□□□□ -0.46
CCDC12-210ENST00000604181 NAT1P18440 290 aa12.15□□□□□ -0.46
CCDC12-210ENST00000604181 TGFBR1P36897 503 aa12.15□□□□□ -0.46
CCDC12-210ENST00000604181 RPL11P62913 178 aaKnown RBP12.15□□□□□ -0.46
CCDC12-210ENST00000604181 TSC22D3Q99576 134 aa12.15□□□□□ -0.46
CCDC12-210ENST00000604181 GINS3Q9BRX5 216 aa12.15□□□□□ -0.46
CCDC12-210ENST00000604181 KRTAP4-5Q9BYR2 181 aa12.15□□□□□ -0.46
CCDC12-210ENST00000604181 RABAC1Q9UI14 185 aa12.15□□□□□ -0.46
CCDC12-210ENST00000604181 TRAV2A0A0B4J234 112 aa12.14□□□□□ -0.47
CCDC12-210ENST00000604181 TRAV10A0A0B4J240 114 aa12.14□□□□□ -0.47
CCDC12-210ENST00000604181 K7EQG2 157 aa12.14□□□□□ -0.47
CCDC12-210ENST00000604181 EIF4EP06730 217 aaKnown RBP12.14□□□□□ -0.47
CCDC12-210ENST00000604181 HSPA13P48723 471 aa12.14□□□□□ -0.47
CCDC12-210ENST00000604181 LYSMD2Q8IV50 215 aa12.14□□□□□ -0.47
CCDC12-210ENST00000604181 CMTM1Q8IZ96 169 aa12.14□□□□□ -0.47
CCDC12-210ENST00000604181 CSNK1G2-AS1Q8NCQ2 148 aa12.14□□□□□ -0.47
CCDC12-210ENST00000604181 OR5H2Q8NGV7 314 aa12.14□□□□□ -0.47
CCDC12-210ENST00000604181 MRGPRFQ96AM1 343 aa12.14□□□□□ -0.47
CCDC12-210ENST00000604181 M0R2N4 97 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 TMEM50AO95807 157 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 CD5P06127 495 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 ZNF688P0C7X2 276 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 MED14OSP0DP75 135 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 MIFP14174 115 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 HRH1P35367 487 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 PPP5CP53041 499 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 TAS2R20P59543 309 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 HSPE1P61604 102 aaKnown RBP12.13□□□□□ -0.47
CCDC12-210ENST00000604181 C12orf74Q32Q52 190 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 ZNF600Q6ZNG1 722 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 TBC1D26Q86UD7 250 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 DUSP18Q8NEJ0 188 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 OR4A16Q8NH70 328 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 FCGR1BQ92637 280 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 RAB26Q9ULW5 256 aa12.13□□□□□ -0.47
CCDC12-210ENST00000604181 LRP1BQ9NZR2 4599 aa12.12□□□□□ -0.47
CCDC12-210ENST00000604181 HLA-DMAP28067 261 aa12.12□□□□□ -0.47
CCDC12-210ENST00000604181 MLANAQ16655 118 aa12.12□□□□□ -0.47
CCDC12-210ENST00000604181 H2BFWTQ7Z2G1 175 aa12.12□□□□□ -0.47
CCDC12-210ENST00000604181 STXBP6Q8NFX7 210 aa12.12□□□□□ -0.47
CCDC12-210ENST00000604181 OR6F1Q8NGZ6 308 aa12.12□□□□□ -0.47
CCDC12-210ENST00000604181 RNF126Q9BV68 326 aa12.12□□□□□ -0.47
CCDC12-210ENST00000604181 FNDC4Q9H6D8 234 aaPredicted RBP12.12□□□□□ -0.47
CCDC12-210ENST00000604181 PRSS29PA6NIE9 313 aa12.11□□□□□ -0.47
CCDC12-210ENST00000604181 AMBPP02760 352 aa12.11□□□□□ -0.47
CCDC12-210ENST00000604181 NPBWR1P48145 328 aa12.11□□□□□ -0.47
CCDC12-210ENST00000604181 TAS2R46P59540 309 aa12.11□□□□□ -0.47
CCDC12-210ENST00000604181 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
CCDC12-210ENST00000604181 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms