RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 TRIM63Q969Q1 353 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 SLC25A21Q9BQT8 299 aaPredicted RBP8.76□□□□□ -1.01
CCDC12-209ENST00000604164 ZNF436Q9C0F3 470 aaPredicted RBP8.76□□□□□ -1.01
CCDC12-209ENST00000604164 TUBA4BQ9H853 241 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 DAZ1Q9NQZ3 744 aaKnown RBP8.76□□□□□ -1.01
CCDC12-209ENST00000604164 MRPL27Q9P0M9 148 aaKnown RBP8.76□□□□□ -1.01
CCDC12-209ENST00000604164 TMEM56-RWDD3S4R434 201 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 U3KQK5 164 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 V9GYH0 126 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 TRAV25A0A0B4J276 109 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 FRMD6-AS1P0C7T7 363 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 IGHV4-30-4P0DP06 118 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 AKR1C4P17516 323 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 NPBWR1P48145 328 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 MFAP2P55001 183 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 IZUMO4Q1ZYL8 232 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 AARDQ4LEZ3 155 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 NOXA1Q86UR1 476 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 SELENOHQ8IZQ5 122 aaKnown RBP8.75□□□□□ -1.01
CCDC12-209ENST00000604164 LGI3Q8N145 548 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 UXS1Q8NBZ7 420 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 DUSP18Q8NEJ0 188 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 ZMAT4Q9H898 229 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 ZC4H2Q9NQZ6 224 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 DNAH3Q8TD57 4116 aa8.75□□□□□ -1.01
CCDC12-209ENST00000604164 RPS10-NUDT3A0A1W2PQS6 291 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 TMEM213A2RRL7 107 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 C15orf62A8K5M9 175 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 I3L2K1 104 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 K7EMT4 169 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 GNG7O60262 68 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 MT-CO2P00403 227 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 C8orf88P0DMB2 117 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 SULT1A3P0DMM9 295 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 SULT1A4P0DMN0 295 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 BMI1P35226 326 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 HTR2BP41595 481 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 ZNF79Q15937 498 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 GUCA2BQ16661 112 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 TMEM128Q5BJH2 165 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 TRIQKQ629K1 86 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 RBPMS2Q6ZRY4 209 aaKnown RBP8.74□□□□□ -1.01
CCDC12-209ENST00000604164 SLC16A13Q7RTY0 426 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 Q8N1Y9 231 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 TMEM190Q8WZ59 177 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 PINX1Q96BK5 328 aaKnown RBP8.74□□□□□ -1.01
CCDC12-209ENST00000604164 WWC2-AS2Q96NR7 200 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 CACNG5Q9UF02 275 aa8.74□□□□□ -1.01
CCDC12-209ENST00000604164 IGHV3-21A0A0B4J1V1 117 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 A0A0B4J2A0 478 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 IGHV3-35A0A0C4DH35 117 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 DUXBA0A1W2PPF3 345 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 NAP1L6A6NFF2 107 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 CENPXA8MT69 81 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 CCR6P51684 374 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 CD81P60033 236 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 TMEM187Q14656 261 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 RBMS2Q15434 407 aaKnown RBP8.73□□□□□ -1.01
CCDC12-209ENST00000604164 TM4SF20Q53R12 229 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 SPINK9Q5DT21 86 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 LAMTOR1Q6IAA8 161 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 C11orf87Q6NUJ2 197 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 UNQ9165/PRO28630Q6UXU0 137 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 ADAMTSL5Q6ZMM2 481 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 ASCL2Q99929 193 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 NEURL2Q9BR09 285 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 C20orf24Q9BUV8 137 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 SRRQ9GZT4 340 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 HIPK2Q9H2X6 1198 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 HEYLQ9NQ87 328 aaPredicted RBP8.73□□□□□ -1.01
CCDC12-209ENST00000604164 C19orf73Q9NVV2 129 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 SHPKQ9UHJ6 478 aa8.73□□□□□ -1.01
CCDC12-209ENST00000604164 A0A0G2JRQ6 117 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 IZUMO1RA6ND01 250 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 ZNF785A8K8V0 405 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 CEBPZOSA8MTT3 80 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 CD5P06127 495 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 CTSGP08311 255 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 SMCO1Q147U7 214 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 BTNL8Q6UX41 500 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 TMED4Q7Z7H5 227 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 LHFPL5Q8TAF8 219 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 TMEM230Q96A57 120 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 GPR146Q96CH1 333 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 GINS3Q9BRX5 216 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 CHRDL1Q9BU40 450 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 MLXQ9UH92 298 aa8.72□□□□□ -1.01
CCDC12-209ENST00000604164 TRAV30A0A087WSZ9 112 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 A0A1B0GU03 582 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 F8W735 103 aaPredicted RBP8.71□□□□□ -1.02
CCDC12-209ENST00000604164 YIF1AO95070 293 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 RNASE2P10153 161 aaKnown RBP8.71□□□□□ -1.02
CCDC12-209ENST00000604164 VAMP1P23763 118 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 ADMP35318 185 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 OPRK1P41145 380 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 ATP5IP56385 69 aaPredicted RBP8.71□□□□□ -1.02
CCDC12-209ENST00000604164 UBE2MP61081 183 aaKnown RBP8.71□□□□□ -1.02
CCDC12-209ENST00000604164 ETFRF1Q6IPR1 90 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 Q6ZRM9 215 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms