RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 P0C879 139 aa13.56□□□□□ -0.24
CCDC12-208ENST00000603885 SP6Q3SY56 376 aa13.56□□□□□ -0.24
CCDC12-208ENST00000603885 FAAP20Q6NZ36 180 aa13.56□□□□□ -0.24
CCDC12-208ENST00000603885 SLC35G3Q8N808 338 aa13.56□□□□□ -0.24
CCDC12-208ENST00000603885 TXN2Q99757 166 aa13.56□□□□□ -0.24
CCDC12-208ENST00000603885 SPAG8Q99932 426 aaPredicted RBP13.56□□□□□ -0.24
CCDC12-208ENST00000603885 PDCD10Q9BUL8 212 aa13.56□□□□□ -0.24
CCDC12-208ENST00000603885 RETNQ9HD89 108 aa13.56□□□□□ -0.24
CCDC12-208ENST00000603885 C14orf166Q9Y224 244 aaKnown RBP13.56□□□□□ -0.24
CCDC12-208ENST00000603885 IGHV3OR16-8A0A075B7F1 116 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 A0A0B4J293 547 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 C15orf62A8K5M9 175 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 DISC1C4P0D8 188 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 K7EMT4 169 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 CTDSPLO15194 276 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 IFNA17P01571 189 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 UCP1P25874 307 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 FCGR2BP31994 310 aaPredicted RBP13.55□□□□□ -0.24
CCDC12-208ENST00000603885 SNCAP37840 140 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 SPINK9Q5DT21 86 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 LAMTOR1Q6IAA8 161 aa13.55□□□□□ -0.24
CCDC12-208ENST00000603885 RNASE11Q8TAA1 199 aaKnown RBP13.55□□□□□ -0.24
CCDC12-208ENST00000603885 PINX1Q96BK5 328 aaKnown RBP13.55□□□□□ -0.24
CCDC12-208ENST00000603885 RRNAD1Q96FB5 475 aaKnown RBP13.55□□□□□ -0.24
CCDC12-208ENST00000603885 C6orf62Q9GZU0 229 aaPredicted RBP13.55□□□□□ -0.24
CCDC12-208ENST00000603885 TSPAN4O14817 238 aa13.54□□□□□ -0.24
CCDC12-208ENST00000603885 ST8SIA3O43173 380 aa13.54□□□□□ -0.24
CCDC12-208ENST00000603885 ZNF207O43670 478 aaKnown RBP13.54□□□□□ -0.24
CCDC12-208ENST00000603885 AKAIN1P0CW23 69 aa13.54□□□□□ -0.24
CCDC12-208ENST00000603885 RPL5P46777 297 aaKnown RBP13.54□□□□□ -0.24
CCDC12-208ENST00000603885 SURF2Q15527 256 aaPredicted RBP13.54□□□□□ -0.24
CCDC12-208ENST00000603885 FAM110AQ9BQ89 295 aa13.54□□□□□ -0.24
CCDC12-208ENST00000603885 INS-IGF2F8WCM5 200 aa13.53□□□□□ -0.24
CCDC12-208ENST00000603885 GNG7O60262 68 aa13.53□□□□□ -0.24
CCDC12-208ENST00000603885 IGHV3-48P01763 117 aa13.53□□□□□ -0.24
CCDC12-208ENST00000603885 HOXA1P49639 335 aaPredicted RBP13.53□□□□□ -0.24
CCDC12-208ENST00000603885 ZFAND6Q6FIF0 208 aa13.53□□□□□ -0.24
CCDC12-208ENST00000603885 OR4C16Q8NGL9 310 aa13.53□□□□□ -0.24
CCDC12-208ENST00000603885 PRRT1Q99946 306 aa13.53□□□□□ -0.24
CCDC12-208ENST00000603885 GGTLC1Q9BX51 225 aa13.53□□□□□ -0.24
CCDC12-208ENST00000603885 TMEM222Q9H0R3 208 aa13.53□□□□□ -0.24
CCDC12-208ENST00000603885 LOC102724200A0A096LPH7 203 aaPredicted RBP13.52□□□□□ -0.25
CCDC12-208ENST00000603885 TEX13DA0A0J9YY54 714 aaPredicted RBP13.52□□□□□ -0.25
CCDC12-208ENST00000603885 YIF1AO95070 293 aa13.52□□□□□ -0.25
CCDC12-208ENST00000603885 OR5AC1P0C628 307 aa13.52□□□□□ -0.25
CCDC12-208ENST00000603885 FAM219AQ8IW50 185 aa13.52□□□□□ -0.25
CCDC12-208ENST00000603885 RTBDNQ9BSG5 229 aaPredicted RBP13.52□□□□□ -0.25
CCDC12-208ENST00000603885 NXF2Q9GZY0 626 aaKnown RBP13.52□□□□□ -0.25
CCDC12-208ENST00000603885 NAA60Q9H7X0 242 aa13.52□□□□□ -0.25
CCDC12-208ENST00000603885 ENY2Q9NPA8 101 aa13.52□□□□□ -0.25
CCDC12-208ENST00000603885 RSL24D1Q9UHA3 163 aaKnown RBP13.52□□□□□ -0.25
CCDC12-208ENST00000603885 CSMD3Q7Z407 3707 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 A0A0G2JRQ6 117 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 H3BMQ9 156 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 CORTO00230 105 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 CDS2O95674 445 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 ETV6P41212 452 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 NPBWR1P48145 328 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 SUB1P53999 127 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC12-208ENST00000603885 DUSP18Q8NEJ0 188 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 ZNF414Q96IQ9 312 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 OR10C1Q96KK4 312 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 SLIRPQ9GZT3 109 aaKnown RBP13.51□□□□□ -0.25
CCDC12-208ENST00000603885 SMPXQ9UHP9 88 aa13.51□□□□□ -0.25
CCDC12-208ENST00000603885 IGHV7-4-1A0A0J9YVY3 117 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 ANKRD20A5PA0PJZ0 165 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 OR4C46A6NHA9 309 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 GSTZ1O43708 216 aaPredicted RBP13.5□□□□□ -0.25
CCDC12-208ENST00000603885 DHODHQ02127 395 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 TMEM116Q8NCL8 245 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 OR51S1Q8NGJ8 323 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 GLYATL2Q8WU03 294 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 RBPMSQ93062 196 aaKnown RBP13.5□□□□□ -0.25
CCDC12-208ENST00000603885 RHPN1-AS1Q9BWJ2 59 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 UBQLN2Q9UHD9 624 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 GPR132Q9UNW8 380 aa13.5□□□□□ -0.25
CCDC12-208ENST00000603885 STARD9Q9P2P6 4700 aa13.49□□□□□ -0.25
CCDC12-208ENST00000603885 CRYM-AS1A6NIL9 109 aa13.49□□□□□ -0.25
CCDC12-208ENST00000603885 CHEK1O14757 476 aa13.49□□□□□ -0.25
CCDC12-208ENST00000603885 RNASE2P10153 161 aaKnown RBP13.49□□□□□ -0.25
CCDC12-208ENST00000603885 PVRIGQ6DKI7 326 aa13.49□□□□□ -0.25
CCDC12-208ENST00000603885 MCFD2Q8NI22 146 aa13.49□□□□□ -0.25
CCDC12-208ENST00000603885 GINS3Q9BRX5 216 aa13.49□□□□□ -0.25
CCDC12-208ENST00000603885 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.49□□□□□ -0.25
CCDC12-208ENST00000603885 SCP2D1Q9UJQ7 156 aa13.49□□□□□ -0.25
CCDC12-208ENST00000603885 TRAV14DV4A0A0A6YYC5 116 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 FABP12A6NFH5 140 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 TNFSF8P32971 234 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 SPCS3P61009 180 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 AARDQ4LEZ3 155 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 Q6ZRM9 215 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 SELENOHQ8IZQ5 122 aaKnown RBP13.48□□□□□ -0.25
CCDC12-208ENST00000603885 IL17DQ8TAD2 202 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 LHFPL5Q8TAF8 219 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 RNF2Q99496 336 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 TENM2Q9NT68 2774 aa13.48□□□□□ -0.25
CCDC12-208ENST00000603885 IGHV3-49A0A0A0MS15 119 aa13.47□□□□□ -0.25
CCDC12-208ENST00000603885 BMI1P35226 326 aa13.47□□□□□ -0.25
CCDC12-208ENST00000603885 APOC4P55056 127 aa13.47□□□□□ -0.25
CCDC12-208ENST00000603885 ODF3L2Q3SX64 289 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms