RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 CTSGP08311 255 aa19.5■□□□□ 0.71
PNKP-216ENST00000601816 UCP1P25874 307 aa19.5■□□□□ 0.71
PNKP-216ENST00000601816 RELQ04864 619 aaPredicted RBP19.5■□□□□ 0.71
PNKP-216ENST00000601816 SLC35G3Q8N808 338 aa19.5■□□□□ 0.71
PNKP-216ENST00000601816 TXN2Q99757 166 aa19.5■□□□□ 0.71
PNKP-216ENST00000601816 PDCD10Q9BUL8 212 aa19.5■□□□□ 0.71
PNKP-216ENST00000601816 RABL2AQ9UBK7 228 aaPredicted RBP19.5■□□□□ 0.71
PNKP-216ENST00000601816 RABL2BQ9UNT1 228 aa19.5■□□□□ 0.71
PNKP-216ENST00000601816 C14orf166Q9Y224 244 aaKnown RBP19.5■□□□□ 0.71
PNKP-216ENST00000601816 IGHV3OR16-8A0A075B7F1 116 aa19.49■□□□□ 0.71
PNKP-216ENST00000601816 A0A0B4J293 547 aa19.49■□□□□ 0.71
PNKP-216ENST00000601816 DISC1C4P0D8 188 aa19.49■□□□□ 0.71
PNKP-216ENST00000601816 K7EMT4 169 aa19.49■□□□□ 0.71
PNKP-216ENST00000601816 ST8SIA3O43173 380 aa19.49■□□□□ 0.71
PNKP-216ENST00000601816 IFNA17P01571 189 aa19.49■□□□□ 0.71
PNKP-216ENST00000601816 FCGR2BP31994 310 aaPredicted RBP19.49■□□□□ 0.71
PNKP-216ENST00000601816 RNASE11Q8TAA1 199 aaKnown RBP19.49■□□□□ 0.71
PNKP-216ENST00000601816 PINX1Q96BK5 328 aaKnown RBP19.49■□□□□ 0.71
PNKP-216ENST00000601816 RRNAD1Q96FB5 475 aaKnown RBP19.49■□□□□ 0.71
PNKP-216ENST00000601816 SPAG8Q99932 426 aaPredicted RBP19.49■□□□□ 0.71
PNKP-216ENST00000601816 RYR3Q15413 4870 aa19.49■□□□□ 0.71
PNKP-216ENST00000601816 C15orf62A8K5M9 175 aa19.48■□□□□ 0.71
PNKP-216ENST00000601816 ZNF207O43670 478 aaKnown RBP19.48■□□□□ 0.71
PNKP-216ENST00000601816 AKAIN1P0CW23 69 aa19.48■□□□□ 0.71
PNKP-216ENST00000601816 LAMTOR1Q6IAA8 161 aa19.48■□□□□ 0.71
PNKP-216ENST00000601816 FAM110AQ9BQ89 295 aa19.48■□□□□ 0.71
PNKP-216ENST00000601816 C6orf62Q9GZU0 229 aaPredicted RBP19.48■□□□□ 0.71
PNKP-216ENST00000601816 TSPAN4O14817 238 aa19.47■□□□□ 0.71
PNKP-216ENST00000601816 IGHV3-48P01763 117 aa19.47■□□□□ 0.71
PNKP-216ENST00000601816 SNCAP37840 140 aa19.47■□□□□ 0.71
PNKP-216ENST00000601816 RPL5P46777 297 aaKnown RBP19.47■□□□□ 0.71
PNKP-216ENST00000601816 SURF2Q15527 256 aaPredicted RBP19.47■□□□□ 0.71
PNKP-216ENST00000601816 ZFAND6Q6FIF0 208 aa19.47■□□□□ 0.71
PNKP-216ENST00000601816 OR4C16Q8NGL9 310 aa19.47■□□□□ 0.71
PNKP-216ENST00000601816 INS-IGF2F8WCM5 200 aa19.46■□□□□ 0.71
PNKP-216ENST00000601816 GGTLC1Q9BX51 225 aa19.46■□□□□ 0.71
PNKP-216ENST00000601816 A0A0G2JRQ6 117 aa19.45■□□□□ 0.7
PNKP-216ENST00000601816 TEX13DA0A0J9YY54 714 aaPredicted RBP19.45■□□□□ 0.7
PNKP-216ENST00000601816 GNG7O60262 68 aa19.45■□□□□ 0.7
PNKP-216ENST00000601816 YIF1AO95070 293 aa19.45■□□□□ 0.7
PNKP-216ENST00000601816 OR5AC1P0C628 307 aa19.45■□□□□ 0.7
PNKP-216ENST00000601816 HOXA1P49639 335 aaPredicted RBP19.45■□□□□ 0.7
PNKP-216ENST00000601816 ZNF414Q96IQ9 312 aa19.45■□□□□ 0.7
PNKP-216ENST00000601816 RTBDNQ9BSG5 229 aaPredicted RBP19.45■□□□□ 0.7
PNKP-216ENST00000601816 NXF2Q9GZY0 626 aaKnown RBP19.45■□□□□ 0.7
PNKP-216ENST00000601816 TMEM222Q9H0R3 208 aa19.45■□□□□ 0.7
PNKP-216ENST00000601816 NAA60Q9H7X0 242 aa19.45■□□□□ 0.7
PNKP-216ENST00000601816 RSL24D1Q9UHA3 163 aaKnown RBP19.45■□□□□ 0.7
PNKP-216ENST00000601816 LOC102724200A0A096LPH7 203 aaPredicted RBP19.44■□□□□ 0.7
PNKP-216ENST00000601816 H3BMQ9 156 aa19.44■□□□□ 0.7
PNKP-216ENST00000601816 ETV6P41212 452 aa19.44■□□□□ 0.7
PNKP-216ENST00000601816 PRRT1Q99946 306 aa19.44■□□□□ 0.7
PNKP-216ENST00000601816 SLIRPQ9GZT3 109 aaKnown RBP19.44■□□□□ 0.7
PNKP-216ENST00000601816 ENY2Q9NPA8 101 aa19.44■□□□□ 0.7
PNKP-216ENST00000601816 GSTZ1O43708 216 aaPredicted RBP19.43■□□□□ 0.7
PNKP-216ENST00000601816 SUB1P53999 127 aaKnown RBP eCLIP19.43■□□□□ 0.7
PNKP-216ENST00000601816 FAM219AQ8IW50 185 aa19.43■□□□□ 0.7
PNKP-216ENST00000601816 DUSP18Q8NEJ0 188 aa19.43■□□□□ 0.7
PNKP-216ENST00000601816 SMPXQ9UHP9 88 aa19.43■□□□□ 0.7
PNKP-216ENST00000601816 ANKRD20A5PA0PJZ0 165 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 OR4C46A6NHA9 309 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 CORTO00230 105 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 CDS2O95674 445 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 NPBWR1P48145 328 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 DHODHQ02127 395 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 OR51S1Q8NGJ8 323 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 GLYATL2Q8WU03 294 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 OR10C1Q96KK4 312 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 UBQLN2Q9UHD9 624 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 GPR132Q9UNW8 380 aa19.42■□□□□ 0.7
PNKP-216ENST00000601816 IGHV7-4-1A0A0J9YVY3 117 aa19.41■□□□□ 0.7
PNKP-216ENST00000601816 RNASE2P10153 161 aaKnown RBP19.41■□□□□ 0.7
PNKP-216ENST00000601816 TMEM116Q8NCL8 245 aa19.41■□□□□ 0.7
PNKP-216ENST00000601816 LHFPL5Q8TAF8 219 aa19.41■□□□□ 0.7
PNKP-216ENST00000601816 RBPMSQ93062 196 aaKnown RBP19.41■□□□□ 0.7
PNKP-216ENST00000601816 RHPN1-AS1Q9BWJ2 59 aa19.41■□□□□ 0.7
PNKP-216ENST00000601816 CRYM-AS1A6NIL9 109 aa19.4■□□□□ 0.7
PNKP-216ENST00000601816 CHEK1O14757 476 aa19.4■□□□□ 0.7
PNKP-216ENST00000601816 TNFSF8P32971 234 aa19.4■□□□□ 0.7
PNKP-216ENST00000601816 PVRIGQ6DKI7 326 aa19.4■□□□□ 0.7
PNKP-216ENST00000601816 Q6ZRM9 215 aa19.4■□□□□ 0.7
PNKP-216ENST00000601816 MCFD2Q8NI22 146 aa19.4■□□□□ 0.7
PNKP-216ENST00000601816 IGHV3-49A0A0A0MS15 119 aa19.39■□□□□ 0.69
PNKP-216ENST00000601816 FABP12A6NFH5 140 aa19.39■□□□□ 0.69
PNKP-216ENST00000601816 SPCS3P61009 180 aa19.39■□□□□ 0.69
PNKP-216ENST00000601816 SELENOHQ8IZQ5 122 aaKnown RBP19.39■□□□□ 0.69
PNKP-216ENST00000601816 RNF2Q99496 336 aa19.39■□□□□ 0.69
PNKP-216ENST00000601816 GINS3Q9BRX5 216 aa19.39■□□□□ 0.69
PNKP-216ENST00000601816 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.39■□□□□ 0.69
PNKP-216ENST00000601816 SCP2D1Q9UJQ7 156 aa19.39■□□□□ 0.69
PNKP-216ENST00000601816 DYNC2H1Q8NCM8 4307 aaKnown RBP19.39■□□□□ 0.69
PNKP-216ENST00000601816 TRAV14DV4A0A0A6YYC5 116 aa19.38■□□□□ 0.69
PNKP-216ENST00000601816 ODF3L2Q3SX64 289 aa19.38■□□□□ 0.69
PNKP-216ENST00000601816 AARDQ4LEZ3 155 aa19.38■□□□□ 0.69
PNKP-216ENST00000601816 TMEM268Q5VZI3 342 aa19.38■□□□□ 0.69
PNKP-216ENST00000601816 SOSTQ9BQB4 213 aa19.38■□□□□ 0.69
PNKP-216ENST00000601816 TOMM20LQ6UXN7 152 aa19.37■□□□□ 0.69
PNKP-216ENST00000601816 ZNF600Q6ZNG1 722 aa19.37■□□□□ 0.69
PNKP-216ENST00000601816 OR52E5Q8NH55 327 aa19.37■□□□□ 0.69
PNKP-216ENST00000601816 IL17DQ8TAD2 202 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms