RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 TMEM187Q14656 261 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 VMA21Q3ZAQ7 101 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 BTNL8Q6UX41 500 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 SSX9Q7RTT3 188 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 WFDC3Q8IUB2 231 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 DMBX1Q8NFW5 382 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 RNASE11Q8TAA1 199 aaKnown RBP7.39□□□□□ -1.23
HIF3A-219ENST00000600879 GLYATL2Q8WU03 294 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 TMEM68Q96MH6 324 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 SEC22CQ9BRL7 303 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 AIFM2Q9BRQ8 373 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 MARVELD1Q9BSK0 173 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 PRR13Q9NZ81 148 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 FBXL17Q9UF56 701 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 DNAH6Q9C0G6 4158 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 DYNC1H1Q14204 4646 aaKnown RBP7.38□□□□□ -1.23
HIF3A-219ENST00000600879 A0A1B0GVY2 172 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 FAM223BA6NKX1 122 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 SRRM4A7MD48 611 aaKnown RBP7.38□□□□□ -1.23
HIF3A-219ENST00000600879 PRAF2O60831 178 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 ATG12O94817 140 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 KRASP01116 189 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 IGKV1-39P01597 117 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 IGKV1D-39P04432 117 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 IL5P05113 134 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 SAA1P0DJI8 122 aaPredicted RBP7.38□□□□□ -1.23
HIF3A-219ENST00000600879 CTRB1P17538 263 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 RPL35AP18077 110 aaKnown RBP7.38□□□□□ -1.23
HIF3A-219ENST00000600879 G6PCP35575 357 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 AKR1C2P52895 323 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 APOC4P55056 127 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 SRPXP78539 464 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 DHRS2Q13268 280 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 MRGPRG-AS1Q2M3A8 158 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 TMEM268Q5VZI3 342 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 CTRB2Q6GPI1 263 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 FAM223AQ8IWN6 122 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 SELENOHQ8IZQ5 122 aaKnown RBP7.38□□□□□ -1.23
HIF3A-219ENST00000600879 VKORC1L1Q8N0U8 176 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 LGI3Q8N145 548 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 UXS1Q8NBZ7 420 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 COQ8AQ8NI60 647 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 LHFPL5Q8TAF8 219 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 SRSF12Q8WXF0 261 aaKnown RBP7.38□□□□□ -1.23
HIF3A-219ENST00000600879 RBPMSQ93062 196 aaKnown RBP7.38□□□□□ -1.23
HIF3A-219ENST00000600879 GPN1Q9HCN4 374 aaPredicted RBP7.38□□□□□ -1.23
HIF3A-219ENST00000600879 TP53TG1Q9Y2A0 90 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 DMRT1Q9Y5R6 373 aa7.38□□□□□ -1.23
HIF3A-219ENST00000600879 FAT2Q9NYQ8 4349 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 TMEM213A2RRL7 107 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 MARCH11A6NNE9 402 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 GGCTO75223 188 aaKnown RBP7.37□□□□□ -1.23
HIF3A-219ENST00000600879 CDS2O95674 445 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 UBE2KP61086 200 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 OXA1LQ15070 435 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 POU2AF1Q16633 256 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 C15orf32Q32M92 178 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 ANKRD55Q3KP44 614 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 C10orf55Q5SWW7 151 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 OR4A47Q6IF82 309 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 Q6ZWC4 215 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 PUSL1Q8N0Z8 303 aaKnown RBP7.37□□□□□ -1.23
HIF3A-219ENST00000600879 TMEM217Q8N7C4 229 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 SLC35G3Q8N808 338 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 TEX45Q8NA69 505 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 VSTM2AQ8TAG5 236 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 ZNF431Q8TF32 576 aaPredicted RBP7.37□□□□□ -1.23
HIF3A-219ENST00000600879 IL22RA2Q969J5 263 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 RNF183Q96D59 192 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 RRNAD1Q96FB5 475 aaKnown RBP7.37□□□□□ -1.23
HIF3A-219ENST00000600879 SEC22AQ96IW7 307 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 TMEM56Q96MV1 263 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 TMEM140Q9NV12 185 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 TMEM56-RWDD3S4R434 201 aa7.37□□□□□ -1.23
HIF3A-219ENST00000600879 DNAH2Q9P225 4427 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 TRBV9A0A0B4J1U6 114 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 PIGBOS1A0A0B4J2F0 54 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 CREBL2O60519 120 aaPredicted RBP7.36□□□□□ -1.23
HIF3A-219ENST00000600879 KBTBD11O94819 623 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 IGKV1-5P01602 117 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 FCGR2BP31994 310 aaPredicted RBP7.36□□□□□ -1.23
HIF3A-219ENST00000600879 ARL3P36405 182 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 PRSS8Q16651 343 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 CLEC19AQ6UXS0 136 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 H2BFWTQ7Z2G1 175 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 C12orf45Q8N5I9 185 aaPredicted RBP7.36□□□□□ -1.23
HIF3A-219ENST00000600879 STPG3Q8N7X2 389 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 OR1L6Q8NGR2 347 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 TMEM167AQ8TBQ9 72 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 MITD1Q8WV92 249 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 OR2A7Q96R45 310 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 BET1LQ9NYM9 111 aa7.36□□□□□ -1.23
HIF3A-219ENST00000600879 TRAV3A0A0B4J244 114 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 A0A0B4J2A0 478 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 A0A0G2JRQ6 117 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 DUXBA0A1W2PPF3 345 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 HMX3A6NHT5 357 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 SNRPGP15A8MWD9 76 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 LGALS9O00182 355 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 UPK2O00526 184 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms