RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 CYB5BO43169 146 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 TGOLN2O43493 480 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 PITX3O75364 302 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 IGHV3-23P01764 117 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 FOLR2P14207 255 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 FAUP35544 74 aaKnown RBP6.63□□□□□ -1.35
SSBP4-208ENST00000600628 AKR1C2P52895 323 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 SPCS3P61009 180 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 SLC25A24Q6NUK1 477 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 HAPLN4Q86UW8 402 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 SGPP2Q8IWX5 399 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 TMEM190Q8WZ59 177 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 OR10C1Q96KK4 312 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 TXN2Q99757 166 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.63□□□□□ -1.35
SSBP4-208ENST00000600628 C19orf73Q9NVV2 129 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 C21orf62Q9NYP8 219 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 S4R3C0 116 aa6.63□□□□□ -1.35
SSBP4-208ENST00000600628 DUXBA0A1W2PPF3 345 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 K7EMT4 169 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 PLA2G10O15496 165 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 SLC25A6P12236 298 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 CBLN1P23435 193 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 GPR183P32249 361 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 UBE2MP61081 183 aaKnown RBP6.62□□□□□ -1.35
SSBP4-208ENST00000600628 TRIM16LQ309B1 348 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 FAM106AQ4KMX7 169 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 C2orf83Q53S99 150 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 TMEM268Q5VZI3 342 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 LINC00322Q6ZN03 302 aaPredicted RBP6.62□□□□□ -1.35
SSBP4-208ENST00000600628 LYZL2Q7Z4W2 148 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 SLC35G3Q8N808 338 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 RRNAD1Q96FB5 475 aaKnown RBP6.62□□□□□ -1.35
SSBP4-208ENST00000600628 LYSTQ99698 3801 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 HINT2Q9BX68 163 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 FNDC4Q9H6D8 234 aaPredicted RBP6.62□□□□□ -1.35
SSBP4-208ENST00000600628 PLEKHA3Q9HB20 300 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 MCUBQ9NWR8 336 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 TECRQ9NZ01 308 aaKnown RBP6.62□□□□□ -1.35
SSBP4-208ENST00000600628 HSPB7Q9UBY9 170 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 CACFD1Q9UGQ2 172 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 MLXQ9UH92 298 aa6.62□□□□□ -1.35
SSBP4-208ENST00000600628 DYNC2H1Q8NCM8 4307 aaKnown RBP6.62□□□□□ -1.35
SSBP4-208ENST00000600628 NAP1L6A6NFF2 107 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 OR2T8A6NH00 312 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 NDUFA4O00483 81 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 NDUFB6O95139 128 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 IL7P13232 177 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 ERHP84090 104 aaKnown RBP6.61□□□□□ -1.35
SSBP4-208ENST00000600628 TNFRSF9Q07011 255 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 RBMS2Q15434 407 aaKnown RBP6.61□□□□□ -1.35
SSBP4-208ENST00000600628 ANKRD55Q3KP44 614 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 CD300EQ496F6 205 aaPredicted RBP6.61□□□□□ -1.35
SSBP4-208ENST00000600628 TM4SF20Q53R12 229 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 MARC2Q969Z3 335 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 ASCL2Q99929 193 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 C7orf50Q9BRJ6 194 aaKnown RBP6.61□□□□□ -1.35
SSBP4-208ENST00000600628 PRR13Q9NZ81 148 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 MRPL36Q9P0J6 103 aaKnown RBP6.61□□□□□ -1.35
SSBP4-208ENST00000600628 CACNG5Q9UF02 275 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 KCNIP3Q9Y2W7 256 aa6.61□□□□□ -1.35
SSBP4-208ENST00000600628 STARD9Q9P2P6 4700 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 A0A1B0GU03 582 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 C15orf62A8K5M9 175 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 MT-CO2P00403 227 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 FRMD6-AS1P0C7T7 363 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 SULT1A3P0DMM9 295 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 SULT1A4P0DMN0 295 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 AKR1C4P17516 323 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 CCR6P51684 374 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 MFAP4P55083 255 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 SRPXP78539 464 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 PPP1R1AQ13522 171 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 SPINK9Q5DT21 86 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 LCN12Q6JVE5 192 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 PLET1Q6UQ28 207 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 SBSPONQ8IVN8 264 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 LGI3Q8N145 548 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 UXS1Q8NBZ7 420 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 OR4X1Q8NH49 305 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 CACNG8Q8WXS5 425 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 DAZ1Q9NQZ3 744 aaKnown RBP6.6□□□□□ -1.35
SSBP4-208ENST00000600628 GAR1Q9NY12 217 aaKnown RBP6.6□□□□□ -1.35
SSBP4-208ENST00000600628 MRPL27Q9P0M9 148 aaKnown RBP6.6□□□□□ -1.35
SSBP4-208ENST00000600628 U3KQK5 164 aa6.6□□□□□ -1.35
SSBP4-208ENST00000600628 SACSQ9NZJ4 4579 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 IGHV3-21A0A0B4J1V1 117 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 TRAV25A0A0B4J276 109 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 PIGBOS1A0A0B4J2F0 54 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 FAM90A26D6RGX4 464 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 CORTO00230 105 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 SFT2D2O95562 160 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 TMEM50AO95807 157 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 IFNA17P01571 189 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 IGKV1-17P01599 117 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 IGHV4-30-4P0DP06 118 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 HTR2BP41595 481 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 SMCO1Q147U7 214 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 TMEM61Q8N0U2 210 aa6.59□□□□□ -1.35
SSBP4-208ENST00000600628 CENPSQ8N2Z9 138 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms