RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 FAM219AQ8IW50 185 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 DEFB125Q8N687 156 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 SLC35G3Q8N808 338 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 OR4D10Q8NGI6 311 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 OR13C8Q8NGS7 320 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
IRF3-226ENST00000600453 MARCH1Q8TCQ1 289 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 SCGB3A2Q96PL1 93 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 PRRT1Q99946 306 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 C6orf62Q9GZU0 229 aaPredicted RBP11.76□□□□□ -0.53
IRF3-226ENST00000600453 SRD5A3Q9H8P0 318 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 ENY2Q9NPA8 101 aa11.76□□□□□ -0.53
IRF3-226ENST00000600453 TEX13DA0A0J9YY54 714 aaPredicted RBP11.75□□□□□ -0.53
IRF3-226ENST00000600453 SCAF4O95104 1147 aaKnown RBP11.75□□□□□ -0.53
IRF3-226ENST00000600453 CTSGP08311 255 aa11.75□□□□□ -0.53
IRF3-226ENST00000600453 UCP1P25874 307 aa11.75□□□□□ -0.53
IRF3-226ENST00000600453 NPBWR1P48145 328 aa11.75□□□□□ -0.53
IRF3-226ENST00000600453 DUSP18Q8NEJ0 188 aa11.75□□□□□ -0.53
IRF3-226ENST00000600453 SPAG8Q99932 426 aaPredicted RBP11.75□□□□□ -0.53
IRF3-226ENST00000600453 CHRDL1Q9BU40 450 aa11.75□□□□□ -0.53
IRF3-226ENST00000600453 C20orf24Q9BUV8 137 aa11.75□□□□□ -0.53
IRF3-226ENST00000600453 CACFD1Q9UGQ2 172 aa11.75□□□□□ -0.53
IRF3-226ENST00000600453 SCP2D1Q9UJQ7 156 aa11.75□□□□□ -0.53
IRF3-226ENST00000600453 NBEAL2Q6ZNJ1 2754 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 A0A0B4J293 547 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 I3L2K1 104 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 CORTO00230 105 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 TSPAN4O14817 238 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 GSTZ1O43708 216 aaPredicted RBP11.74□□□□□ -0.53
IRF3-226ENST00000600453 GNG7O60262 68 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 CDS2O95674 445 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 MT-CO2P00403 227 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 IGKV1-5P01602 117 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 SP6Q3SY56 376 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 CASC10Q5T4H9 136 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 IL17DQ8TAD2 202 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 TMEM222Q9H0R3 208 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.74□□□□□ -0.53
IRF3-226ENST00000600453 KCNIP3Q9Y2W7 256 aa11.74□□□□□ -0.53
IRF3-226ENST00000600453 FABP12A6NFH5 140 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
IRF3-226ENST00000600453 ST8SIA3O43173 380 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 SCGB2A1O75556 95 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 CD5P06127 495 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 P0C879 139 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 BMI1P35226 326 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 ADMP35318 185 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 CMC4P56277 68 aaPredicted RBP11.73□□□□□ -0.53
IRF3-226ENST00000600453 PINX1Q96BK5 328 aaKnown RBP11.73□□□□□ -0.53
IRF3-226ENST00000600453 RTBDNQ9BSG5 229 aaPredicted RBP11.73□□□□□ -0.53
IRF3-226ENST00000600453 HIPK2Q9H2X6 1198 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 EDA2RQ9HAV5 297 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 GPR132Q9UNW8 380 aa11.73□□□□□ -0.53
IRF3-226ENST00000600453 RBMY1BA6NDE4 496 aaKnown RBP11.72□□□□□ -0.53
IRF3-226ENST00000600453 RBMY1EA6NEQ0 496 aaKnown RBP11.72□□□□□ -0.53
IRF3-226ENST00000600453 YIF1AO95070 293 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 RBMY1DP0C7P1 496 aaKnown RBP11.72□□□□□ -0.53
IRF3-226ENST00000600453 ETV6P41212 452 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 IZUMO4Q1ZYL8 232 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 OR4C16Q8NGL9 310 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 OR52E5Q8NH55 327 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 MCFD2Q8NI22 146 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 GLYATL2Q8WU03 294 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 RBPMSQ93062 196 aaKnown RBP11.72□□□□□ -0.53
IRF3-226ENST00000600453 GINS3Q9BRX5 216 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 SLIRPQ9GZT3 109 aaKnown RBP11.72□□□□□ -0.53
IRF3-226ENST00000600453 NXF2Q9GZY0 626 aaKnown RBP11.72□□□□□ -0.53
IRF3-226ENST00000600453 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 SMPXQ9UHP9 88 aa11.72□□□□□ -0.53
IRF3-226ENST00000600453 LOC102724200A0A096LPH7 203 aaPredicted RBP11.71□□□□□ -0.53
IRF3-226ENST00000600453 TRAV14DV4A0A0A6YYC5 116 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 PIGBOS1A0A0B4J2F0 54 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 ANKRD20A5PA0PJZ0 165 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 OR4C46A6NHA9 309 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 OR5AC1P0C628 307 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 TNFSF8P32971 234 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 HOXA1P49639 335 aaPredicted RBP11.71□□□□□ -0.53
IRF3-226ENST00000600453 SPCS3P61009 180 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 OR51S1Q8NGJ8 323 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 OR10C1Q96KK4 312 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 FAM110AQ9BQ89 295 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 GGTLC1Q9BX51 225 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 SELENOKQ9Y6D0 94 aa11.71□□□□□ -0.53
IRF3-226ENST00000600453 IGHV7-4-1A0A0J9YVY3 117 aa11.7□□□□□ -0.54
IRF3-226ENST00000600453 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
IRF3-226ENST00000600453 SPINK9Q5DT21 86 aa11.7□□□□□ -0.54
IRF3-226ENST00000600453 PVRIGQ6DKI7 326 aa11.7□□□□□ -0.54
IRF3-226ENST00000600453 FAAP20Q6NZ36 180 aa11.7□□□□□ -0.54
IRF3-226ENST00000600453 TMEM116Q8NCL8 245 aa11.7□□□□□ -0.54
IRF3-226ENST00000600453 HUWE1Q7Z6Z7 4374 aaKnown RBP11.7□□□□□ -0.54
IRF3-226ENST00000600453 CRYM-AS1A6NIL9 109 aa11.69□□□□□ -0.54
IRF3-226ENST00000600453 TMEM50AO95807 157 aa11.69□□□□□ -0.54
IRF3-226ENST00000600453 HTR2BP41595 481 aa11.69□□□□□ -0.54
IRF3-226ENST00000600453 AP3S2P59780 193 aa11.69□□□□□ -0.54
IRF3-226ENST00000600453 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
IRF3-226ENST00000600453 AARDQ4LEZ3 155 aa11.69□□□□□ -0.54
IRF3-226ENST00000600453 NOXA1Q86UR1 476 aa11.69□□□□□ -0.54
IRF3-226ENST00000600453 SELENOHQ8IZQ5 122 aaKnown RBP11.69□□□□□ -0.54
IRF3-226ENST00000600453 IL22RA2Q969J5 263 aa11.69□□□□□ -0.54
IRF3-226ENST00000600453 SOSTQ9BQB4 213 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms