RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ZFYVE26Q68DK2 2539 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 SCO2A0A1W2PP80 73 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 KBTBD11O94819 623 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 C1QTNF9P0C862 333 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 OR10J1P30954 320 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 KRTDAPP60985 99 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 ZNF90Q03938 601 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 OR5I1Q13606 314 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 PRR31Q5SQ13 230 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 ASPHD1Q5U4P2 390 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 OR9G1Q8NH87 305 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 GOLT1BQ9Y3E0 138 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 TIMM9Q9Y5J7 89 aa9.42□□□□□ -0.9
ARHGEF1-220ENST00000600274 CD3EP07766 207 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 GATA4P43694 442 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 TCL1AP56279 114 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 TMEM183AQ8IXX5 376 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 TMEM256Q8N2U0 113 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 OR2T6Q8NHC8 308 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 FLYWCH2Q96CP2 140 aaKnown RBP9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 MDFIC2A0A1B0GVS7 189 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 TMEM178BH3BS89 294 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 KIR2DS2P43631 304 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 LGALS4P56470 323 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 PSG5Q15238 335 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 MIR17HGQ75NE6 70 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 SGMS2Q8NHU3 365 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 VN1R17PQ8TDU5 208 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 CTSZQ9UBR2 303 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 A0A087WWC5 75 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 A0A1B0GWJ7 208 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 B4DEV8 164 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 NTF3P20783 257 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 OPRK1P41145 380 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 KIAA1644Q3SXP7 199 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 RPH3ALQ9UNE2 315 aa9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 RAI1Q7Z5J4 1906 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF1-220ENST00000600274 CGB3P0DN86 165 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 CGB7P0DN87 165 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 NPPCP23582 126 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 CD24P25063 80 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 BPIFB3P59826 476 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 DDB2Q92466 427 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 P2RX4Q99571 388 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 COL25A1Q9BXS0 654 aaPredicted RBP9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 LINC00312Q9Y6C7 94 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 IGHV1-69-2A0A0G2JMI3 117 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 TEX50A0A1B0GTY4 177 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 E7EUB6 86 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 PLGLAQ15195 96 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 IQCJQ1A5X6 159 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 SLC25A48Q6ZT89 311 aaKnown RBP9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 ZNF114Q8NC26 417 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 BTF3L4Q96K17 158 aa9.4□□□□□ -0.9
ARHGEF1-220ENST00000600274 CYP2G1PQ6ZSU1 146 aa9.4□□□□□ -0.91
ARHGEF1-220ENST00000600274 ADTRPQ96IZ2 230 aa9.4□□□□□ -0.91
ARHGEF1-220ENST00000600274 UHRF2Q96PU4 802 aa9.4□□□□□ -0.91
ARHGEF1-220ENST00000600274 ELOVL5Q9NYP7 299 aa9.4□□□□□ -0.91
ARHGEF1-220ENST00000600274 ONECUT1Q9UBC0 465 aa9.4□□□□□ -0.91
ARHGEF1-220ENST00000600274 PRNDQ9UKY0 176 aa9.4□□□□□ -0.91
ARHGEF1-220ENST00000600274 RBFOX2O43251 390 aaKnown RBP eCLIP9.39□□□□□ -0.918e-7■■■□□ 18.7
ARHGEF1-220ENST00000600274 FCN3O75636 299 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 ANKRD39Q53RE8 183 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 NUP37Q8NFH4 326 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 FAM222BQ8WU58 562 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 RITA1Q96K30 269 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 SRD5A3Q9H8P0 318 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 CENPEQ02224 2701 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 K7ENP7 123 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 UPK2O00526 184 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 OR5G3P0C626 314 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 PMCHP20382 165 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 CBLN1P23435 193 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 CNN1P51911 297 aaKnown RBP9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 RPL8P62917 257 aaKnown RBP9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 JOSD1Q15040 202 aaPredicted RBP9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 EFNB3Q15768 340 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 MAJINQ3KP22 176 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 Q6ZVH6 145 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 MUC15Q8N387 334 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 NHLRC2Q8NBF2 726 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 SGK494Q96LW2 274 aa9.39□□□□□ -0.91
ARHGEF1-220ENST00000600274 F6UZH7 168 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 H3BTX0 84 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 SLC17A3O00476 420 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 TOX4O94842 621 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 YTHDF2Q9Y5A9 579 aaKnown RBP9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 TRAV5A0A0B4J249 113 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 M0R143 59 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 MGST1P10620 155 aaKnown RBP9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 CNTFRP26992 372 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 RHOBP62745 196 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 ERHP84090 104 aaKnown RBP9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 TNXAQ16473 311 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 ZNF439Q8NDP4 499 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 NABP2Q9BQ15 211 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 TMEM14BQ9NUH8 114 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 ACACBO00763 2458 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms