RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 POM121L12Q8N7R1 296 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 GALNT14Q96FL9 552 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 TMEM213A2RRL7 107 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 C11orf94C9JXX5 98 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 S1PR2O95136 353 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 OR2C1O95371 312 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 IGKV1-39P01597 117 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 IGKV1D-39P04432 117 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 TCRBP04435 133 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 LPAR6P43657 344 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 TAS2R31P59538 309 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 SLC25A42Q86VD7 318 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 PUSL1Q8N0Z8 303 aaKnown RBP12.9□□□□□ -0.34
SSBP4-207ENST00000600244 UXS1Q8NBZ7 420 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 DUSP18Q8NEJ0 188 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 GLYATL2Q8WU03 294 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 RARRES2Q99969 163 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 MAP6D1Q9H9H5 199 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 COMMD9Q9P000 198 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 FLVCR2Q9UPI3 526 aa12.9□□□□□ -0.34
SSBP4-207ENST00000600244 TRBV9A0A0B4J1U6 114 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 HRASP01112 189 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 HLA-AP01891 365 aaKnown RBP12.89□□□□□ -0.35
SSBP4-207ENST00000600244 UBE2MP61081 183 aaKnown RBP12.89□□□□□ -0.35
SSBP4-207ENST00000600244 RHOGP84095 191 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 ATP5G2Q06055 141 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 TMEM128Q5BJH2 165 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 GPHB5Q86YW7 130 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 FAM223AQ8IWN6 122 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 CENPSQ8N2Z9 138 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 OR2C3Q8N628 320 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 TEX45Q8NA69 505 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 OR1L6Q8NGR2 347 aa12.89□□□□□ -0.35
SSBP4-207ENST00000600244 TEX13DA0A0J9YY54 714 aaPredicted RBP12.88□□□□□ -0.35
SSBP4-207ENST00000600244 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 PPP5D1E7EU14 171 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 GGCTO75223 188 aaKnown RBP12.88□□□□□ -0.35
SSBP4-207ENST00000600244 CDS2O95674 445 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 OR5AC1P0C628 307 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
SSBP4-207ENST00000600244 RPA2P15927 270 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 NQO2P16083 231 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 RPL35AP18077 110 aaKnown RBP12.88□□□□□ -0.35
SSBP4-207ENST00000600244 DEFA1P59665 94 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 DEFA3P59666 94 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 SP6Q3SY56 376 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 NRARPQ7Z6K4 114 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 TMED4Q7Z7H5 227 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 VKORC1L1Q8N0U8 176 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 AIFM2Q9BRQ8 373 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 TMEM222Q9H0R3 208 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 C20orf85Q9H1P6 137 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 DNAH5Q8TE73 4624 aa12.88□□□□□ -0.35
SSBP4-207ENST00000600244 IGHV4-4A0A075B6R2 117 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 C16orf90A8MZG2 172 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 OR9G9P0C7N8 305 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 P0C879 139 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 AKR1C4P17516 323 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 TMEM187Q14656 261 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 VMA21Q3ZAQ7 101 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 LHFPL5Q8TAF8 219 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 TMEM167AQ8TBQ9 72 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 SEC22AQ96IW7 307 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 TMEM56Q96MV1 263 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 BET1LQ9NYM9 111 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 UBQLN2Q9UHD9 624 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 TMEM56-RWDD3S4R434 201 aa12.87□□□□□ -0.35
SSBP4-207ENST00000600244 A8MWP6 167 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 SERPINE2P07093 398 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 APELAP0DMC3 54 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 PPP1R1AQ13522 171 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 OR4A47Q6IF82 309 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 BTNL8Q6UX41 500 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 Q6ZR54 194 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 VSTM2AQ8TAG5 236 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 OR2A7Q96R45 310 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 NUDT15Q9NV35 164 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 KCNIP3Q9Y2W7 256 aa12.86□□□□□ -0.35
SSBP4-207ENST00000600244 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 KBTBD11O94819 623 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 SFT2D2O95562 160 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 IGKV1-5P01602 117 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 PRH1P02810 166 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 FGF2P09038 288 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 C8orf88P0DMB2 117 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 ANXA7P20073 488 aaKnown RBP12.85□□□□□ -0.35
SSBP4-207ENST00000600244 PRSS8Q16651 343 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 ODF3L2Q3SX64 289 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 FAM209BQ5JX69 171 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 OR11H2Q8NH07 326 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 OR4A5Q8NH83 315 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 ENKURQ8TC29 256 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 IL22RA2Q969J5 263 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 HRH4Q9H3N8 390 aa12.85□□□□□ -0.35
SSBP4-207ENST00000600244 TRAV6A0A075B6T7 132 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 C9orf170A2RU37 121 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 UPK2O00526 184 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 DEFB4AO15263 64 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms