RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 Q8N2B8 174 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 OR2C3Q8N628 320 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 INO80EQ8NBZ0 244 aaPredicted RBP9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 OR4F5Q8NH21 305 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 SLC25A31Q9H0C2 315 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 LYRM2Q9NU23 88 aaPredicted RBP9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 ZNF580Q9UK33 172 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 LINC01548A6NM66 108 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 H0YIZ8 118 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 EGR2P11161 476 aaPredicted RBP9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 LYL1P12980 280 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 ATP5IP56385 69 aaPredicted RBP9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 CD300CQ08708 224 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 TMEM95Q3KNT9 176 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 Q5BKY6 102 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 Q6ZSV7 163 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 ZNF546Q86UE3 836 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 STPG2Q8N412 459 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 ZNF114Q8NC26 417 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 OR1L6Q8NGR2 347 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 NOL4LQ96MY1 436 aaPredicted RBP9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 RNF126Q9BV68 326 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 ZNF355PQ9NSJ1 428 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 AURKAIP1Q9NWT8 199 aaPredicted RBP9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 LINC00527Q9UJ94 153 aa9.44□□□□□ -0.9
SHKBP1-213ENST00000597325 TET2Q6N021 2002 aaPredicted RBP9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 G3V318 75 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 G3V3Q6 166 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 CORTO00230 105 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 FBXO24O75426 580 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 TSPAN9O75954 239 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 NDUFA7O95182 113 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 TMEM50AO95807 157 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 IFNA4P05014 189 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 RNASE2P10153 161 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 CTRB1P17538 263 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 PAX9P55771 341 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 SLC35B1P78383 322 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 C2orf83Q53S99 150 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 ASPHD1Q5U4P2 390 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 CTRB2Q6GPI1 263 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 TTC9CQ8N5M4 171 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 OR5T1Q8NG75 326 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 OR1P1Q8NH06 330 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 HYLS1Q96M11 299 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 OR4C12Q96R67 309 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 P2RX4Q99571 388 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 C11orf1Q9H5F2 150 aa9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 F11RQ9Y624 299 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-213ENST00000597325 FAM24AA6NFZ4 105 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 C15orf62A8K5M9 175 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 ARPC5O15511 151 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 CRYGCP07315 174 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 METTL15P1P0C7V9 234 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 HIST1H1BP16401 226 aaKnown RBP9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 RPL12P30050 165 aaKnown RBP9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 EWSR1Q01844 656 aaKnown RBP eCLIP9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 BAXQ07812 192 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 BSXQ3C1V8 233 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 TMEM65Q6PI78 240 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 TMEM252Q8N6L7 170 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 MISP3Q96FF7 219 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 WNT10AQ9GZT5 417 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 THYN1Q9P016 225 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 TNFSF18Q9UNG2 199 aa9.42□□□□□ -0.9
SHKBP1-213ENST00000597325 FRAS1Q86XX4 4008 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 RPS10-NUDT3A0A1W2PQS6 291 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 IGSF23A1L1A6 192 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 PSMB11A5LHX3 300 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 HMSDA8MTL9 139 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 HNRNPCP07910 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 OPRK1P41145 380 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 SULT1A1P50225 295 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 AP2S1P53680 142 aaPredicted RBP9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 HBG1P69891 147 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 HBG2P69892 147 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 EXOSC2Q13868 293 aaKnown RBP9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 C19orf54Q5BKX5 351 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 OR8G2PQ6IF36 304 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 SLC25A24Q6NUK1 477 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 TMEM14EPQ6UXP3 125 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 ETV3LQ6ZN32 361 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 C19orf35Q6ZS72 473 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 LILRB2Q8N423 598 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 OR10P1Q8NGE3 313 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 RNASEH2CQ8TDP1 164 aaKnown RBP9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 PPP1R14BQ96C90 147 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 AQP10Q96PS8 301 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 MFFQ9GZY8 342 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 C16orf95Q9H693 158 aa9.41□□□□□ -0.9
SHKBP1-213ENST00000597325 H3BUA1 57 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 CST7O76096 145 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 PRH1P02810 166 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 PF4V1P10720 104 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 PROK1P58294 105 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 ETFRF1Q6IPR1 90 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 CENPVQ7Z7K6 275 aaPredicted RBP9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 OR11H4Q8NGC9 324 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 OR1S2Q8NGQ3 325 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms