RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 MT-CO2P00403 227 aa13.39□□□□□ -0.27
CHMP2A-203ENST00000597209 SURF2Q15527 256 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-203ENST00000597209 SCGB2B2Q4G0G5 96 aa13.39□□□□□ -0.27
CHMP2A-203ENST00000597209 DYNC2LI1Q8TCX1 351 aa13.39□□□□□ -0.27
CHMP2A-203ENST00000597209 ZNF414Q96IQ9 312 aa13.39□□□□□ -0.27
CHMP2A-203ENST00000597209 RETNQ9HD89 108 aa13.39□□□□□ -0.27
CHMP2A-203ENST00000597209 AKR1C2P52895 323 aa13.38□□□□□ -0.27
CHMP2A-203ENST00000597209 IZUMO4Q1ZYL8 232 aa13.38□□□□□ -0.27
CHMP2A-203ENST00000597209 PVRIGQ6DKI7 326 aa13.38□□□□□ -0.27
CHMP2A-203ENST00000597209 MARCH1Q8TCQ1 289 aa13.38□□□□□ -0.27
CHMP2A-203ENST00000597209 OR10C1Q96KK4 312 aa13.38□□□□□ -0.27
CHMP2A-203ENST00000597209 C20orf24Q9BUV8 137 aa13.38□□□□□ -0.27
CHMP2A-203ENST00000597209 GGTLC1Q9BX51 225 aa13.38□□□□□ -0.27
CHMP2A-203ENST00000597209 NXF2Q9GZY0 626 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-203ENST00000597209 LOC102724200A0A096LPH7 203 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 DISC1C4P0D8 188 aa13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 ST8SIA3O43173 380 aa13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 TRIM16LQ309B1 348 aa13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 SP6Q3SY56 376 aa13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 SLC35G3Q8N808 338 aa13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 IL17DQ8TAD2 202 aa13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 DIRAS2Q96HU8 199 aa13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 FAM110AQ9BQ89 295 aa13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 SMPXQ9UHP9 88 aa13.37□□□□□ -0.27
CHMP2A-203ENST00000597209 CDS2O95674 445 aa13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 IFNA17P01571 189 aa13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 AKAIN1P0CW23 69 aa13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 SNCAP37840 140 aa13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 IL18Q14116 193 aa13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 ZFAND6Q6FIF0 208 aa13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 FAM219AQ8IW50 185 aa13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 RRNAD1Q96FB5 475 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 RTBDNQ9BSG5 229 aaPredicted RBP13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 PDCD10Q9BUL8 212 aa13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 TMEM222Q9H0R3 208 aa13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 C14orf166Q9Y224 244 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-203ENST00000597209 IGHV7-4-1A0A0J9YVY3 117 aa13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 CORTO00230 105 aa13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 GSTZ1O43708 216 aaPredicted RBP13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 GNG7O60262 68 aa13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 RPL5P46777 297 aaKnown RBP13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 NPBWR1P48145 328 aa13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 SUB1P53999 127 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 AARDQ4LEZ3 155 aa13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 SPINK9Q5DT21 86 aa13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 DUSP18Q8NEJ0 188 aa13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 PINX1Q96BK5 328 aaKnown RBP13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 GPR132Q9UNW8 380 aa13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 DYNC2H1Q8NCM8 4307 aaKnown RBP13.35□□□□□ -0.27
CHMP2A-203ENST00000597209 IGHV3OR16-8A0A075B7F1 116 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 A0A0G2JRQ6 117 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 TEX13DA0A0J9YY54 714 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 OR4C46A6NHA9 309 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 CHEK1O14757 476 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 ZNF207O43670 478 aaKnown RBP13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 DHODHQ02127 395 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 FAAP20Q6NZ36 180 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 TMEM116Q8NCL8 245 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 OR4C16Q8NGL9 310 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 OR52E5Q8NH55 327 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 PRRT1Q99946 306 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 RHPN1-AS1Q9BWJ2 59 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 NAA60Q9H7X0 242 aa13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 RSL24D1Q9UHA3 163 aaKnown RBP13.34□□□□□ -0.27
CHMP2A-203ENST00000597209 TRAV14DV4A0A0A6YYC5 116 aa13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 ANKRD20A5PA0PJZ0 165 aa13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 YIF1AO95070 293 aa13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 OR5AC1P0C628 307 aa13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 RNASE2P10153 161 aaKnown RBP13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 ETV6P41212 452 aa13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 BSXQ3C1V8 233 aa13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 RBPMSQ93062 196 aaKnown RBP13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 SOSTQ9BQB4 213 aa13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 SLIRPQ9GZT3 109 aaKnown RBP13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 ENY2Q9NPA8 101 aa13.33□□□□□ -0.28
CHMP2A-203ENST00000597209 CSMD3Q7Z407 3707 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 LCE6AA0A183 80 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 CRYM-AS1A6NIL9 109 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 TMEM50AO95807 157 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 IGHV3-48P01763 117 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 CD5P06127 495 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 HOXA1P49639 335 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 CMC4P56277 68 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 SPCS3P61009 180 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 ODF3L2Q3SX64 289 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 Q6ZRM9 215 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 SELENOHQ8IZQ5 122 aaKnown RBP13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 RNASE11Q8TAA1 199 aaKnown RBP13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 LHFPL5Q8TAF8 219 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 RNF2Q99496 336 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 OVOL2Q9BRP0 275 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 GINS3Q9BRX5 216 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 C6orf62Q9GZU0 229 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 UBQLN2Q9UHD9 624 aa13.32□□□□□ -0.28
CHMP2A-203ENST00000597209 H3BMQ9 156 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 UBE2CO00762 179 aa13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 NOL3O60936 208 aaKnown RBP13.31□□□□□ -0.28
CHMP2A-203ENST00000597209 BMI1P35226 326 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms