RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 SURF2Q15527 256 aaPredicted RBP18.98■□□□□ 0.63
ZNF558-203ENST00000595786 OR13C8Q8NGS7 320 aa18.98■□□□□ 0.63
ZNF558-203ENST00000595786 C20orf24Q9BUV8 137 aa18.98■□□□□ 0.63
ZNF558-203ENST00000595786 CCDC59Q9P031 241 aaKnown RBP18.98■□□□□ 0.63
ZNF558-203ENST00000595786 MT-CO2P00403 227 aa18.97■□□□□ 0.63
ZNF558-203ENST00000595786 TRIM16LQ309B1 348 aa18.97■□□□□ 0.63
ZNF558-203ENST00000595786 IL17DQ8TAD2 202 aa18.97■□□□□ 0.63
ZNF558-203ENST00000595786 MARCH1Q8TCQ1 289 aa18.97■□□□□ 0.63
ZNF558-203ENST00000595786 DYNC2LI1Q8TCX1 351 aa18.97■□□□□ 0.63
ZNF558-203ENST00000595786 LOC102724200A0A096LPH7 203 aaPredicted RBP18.96■□□□□ 0.63
ZNF558-203ENST00000595786 DISC1C4P0D8 188 aa18.96■□□□□ 0.63
ZNF558-203ENST00000595786 SNCAP37840 140 aa18.96■□□□□ 0.63
ZNF558-203ENST00000595786 IZUMO4Q1ZYL8 232 aa18.96■□□□□ 0.63
ZNF558-203ENST00000595786 RRNAD1Q96FB5 475 aaKnown RBP18.96■□□□□ 0.63
ZNF558-203ENST00000595786 DIRAS2Q96HU8 199 aa18.96■□□□□ 0.63
ZNF558-203ENST00000595786 OR10C1Q96KK4 312 aa18.96■□□□□ 0.63
ZNF558-203ENST00000595786 FAM110AQ9BQ89 295 aa18.96■□□□□ 0.63
ZNF558-203ENST00000595786 PDCD10Q9BUL8 212 aa18.96■□□□□ 0.63
ZNF558-203ENST00000595786 GGTLC1Q9BX51 225 aa18.96■□□□□ 0.63
ZNF558-203ENST00000595786 NXF2Q9GZY0 626 aaKnown RBP18.96■□□□□ 0.63
ZNF558-203ENST00000595786 IFNA17P01571 189 aa18.95■□□□□ 0.62
ZNF558-203ENST00000595786 SUB1P53999 127 aaKnown RBP eCLIP18.95■□□□□ 0.62
ZNF558-203ENST00000595786 SP6Q3SY56 376 aa18.95■□□□□ 0.62
ZNF558-203ENST00000595786 PVRIGQ6DKI7 326 aa18.95■□□□□ 0.62
ZNF558-203ENST00000595786 FAM219AQ8IW50 185 aa18.95■□□□□ 0.62
ZNF558-203ENST00000595786 SLC35G3Q8N808 338 aa18.95■□□□□ 0.62
ZNF558-203ENST00000595786 RETNQ9HD89 108 aa18.95■□□□□ 0.62
ZNF558-203ENST00000595786 SMPXQ9UHP9 88 aa18.95■□□□□ 0.62
ZNF558-203ENST00000595786 C14orf166Q9Y224 244 aaKnown RBP18.95■□□□□ 0.62
ZNF558-203ENST00000595786 DYNC2H1Q8NCM8 4307 aaKnown RBP18.94■□□□□ 0.62
ZNF558-203ENST00000595786 CORTO00230 105 aa18.94■□□□□ 0.62
ZNF558-203ENST00000595786 ST8SIA3O43173 380 aa18.94■□□□□ 0.62
ZNF558-203ENST00000595786 CDS2O95674 445 aa18.94■□□□□ 0.62
ZNF558-203ENST00000595786 AKAIN1P0CW23 69 aa18.94■□□□□ 0.62
ZNF558-203ENST00000595786 RPL5P46777 297 aaKnown RBP18.94■□□□□ 0.62
ZNF558-203ENST00000595786 NPBWR1P48145 328 aa18.94■□□□□ 0.62
ZNF558-203ENST00000595786 TMEM222Q9H0R3 208 aa18.94■□□□□ 0.62
ZNF558-203ENST00000595786 GNG7O60262 68 aa18.93■□□□□ 0.62
ZNF558-203ENST00000595786 IL18Q14116 193 aa18.93■□□□□ 0.62
ZNF558-203ENST00000595786 DUSP18Q8NEJ0 188 aa18.93■□□□□ 0.62
ZNF558-203ENST00000595786 ZNF414Q96IQ9 312 aa18.93■□□□□ 0.62
ZNF558-203ENST00000595786 RTBDNQ9BSG5 229 aaPredicted RBP18.93■□□□□ 0.62
ZNF558-203ENST00000595786 RSL24D1Q9UHA3 163 aaKnown RBP18.93■□□□□ 0.62
ZNF558-203ENST00000595786 CSMD3Q7Z407 3707 aa18.92■□□□□ 0.62
ZNF558-203ENST00000595786 IGHV7-4-1A0A0J9YVY3 117 aa18.92■□□□□ 0.62
ZNF558-203ENST00000595786 TEX13DA0A0J9YY54 714 aaPredicted RBP18.92■□□□□ 0.62
ZNF558-203ENST00000595786 OR4C46A6NHA9 309 aa18.92■□□□□ 0.62
ZNF558-203ENST00000595786 DHODHQ02127 395 aa18.92■□□□□ 0.62
ZNF558-203ENST00000595786 AARDQ4LEZ3 155 aa18.92■□□□□ 0.62
ZNF558-203ENST00000595786 ZFAND6Q6FIF0 208 aa18.92■□□□□ 0.62
ZNF558-203ENST00000595786 PINX1Q96BK5 328 aaKnown RBP18.92■□□□□ 0.62
ZNF558-203ENST00000595786 PRRT1Q99946 306 aa18.92■□□□□ 0.62
ZNF558-203ENST00000595786 GPR132Q9UNW8 380 aa18.92■□□□□ 0.62
ZNF558-203ENST00000595786 GSTZ1O43708 216 aaPredicted RBP18.91■□□□□ 0.62
ZNF558-203ENST00000595786 YIF1AO95070 293 aa18.91■□□□□ 0.62
ZNF558-203ENST00000595786 CMC4P56277 68 aaPredicted RBP18.91■□□□□ 0.62
ZNF558-203ENST00000595786 TMEM116Q8NCL8 245 aa18.91■□□□□ 0.62
ZNF558-203ENST00000595786 OR4C16Q8NGL9 310 aa18.91■□□□□ 0.62
ZNF558-203ENST00000595786 OR52E5Q8NH55 327 aa18.91■□□□□ 0.62
ZNF558-203ENST00000595786 GLYATL2Q8WU03 294 aa18.91■□□□□ 0.62
ZNF558-203ENST00000595786 NAA60Q9H7X0 242 aa18.91■□□□□ 0.62
ZNF558-203ENST00000595786 ENY2Q9NPA8 101 aa18.91■□□□□ 0.62
ZNF558-203ENST00000595786 TENM2Q9NT68 2774 aa18.9■□□□□ 0.62
ZNF558-203ENST00000595786 IGHV3OR16-8A0A075B7F1 116 aa18.9■□□□□ 0.62
ZNF558-203ENST00000595786 TRAV14DV4A0A0A6YYC5 116 aa18.9■□□□□ 0.62
ZNF558-203ENST00000595786 CHEK1O14757 476 aa18.9■□□□□ 0.62
ZNF558-203ENST00000595786 ZNF207O43670 478 aaKnown RBP18.9■□□□□ 0.62
ZNF558-203ENST00000595786 NOL3O60936 208 aaKnown RBP18.9■□□□□ 0.62
ZNF558-203ENST00000595786 CD5P06127 495 aa18.9■□□□□ 0.62
ZNF558-203ENST00000595786 ETV6P41212 452 aa18.9■□□□□ 0.62
ZNF558-203ENST00000595786 SPINK9Q5DT21 86 aa18.9■□□□□ 0.62
ZNF558-203ENST00000595786 RNASE11Q8TAA1 199 aaKnown RBP18.9■□□□□ 0.62
ZNF558-203ENST00000595786 RBPMSQ93062 196 aaKnown RBP18.9■□□□□ 0.62
ZNF558-203ENST00000595786 GINS3Q9BRX5 216 aa18.9■□□□□ 0.62
ZNF558-203ENST00000595786 RHPN1-AS1Q9BWJ2 59 aa18.9■□□□□ 0.62
ZNF558-203ENST00000595786 SLIRPQ9GZT3 109 aaKnown RBP18.9■□□□□ 0.62
ZNF558-203ENST00000595786 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.9■□□□□ 0.62
ZNF558-203ENST00000595786 OR5AC1P0C628 307 aa18.89■□□□□ 0.61
ZNF558-203ENST00000595786 RNASE2P10153 161 aaKnown RBP18.89■□□□□ 0.61
ZNF558-203ENST00000595786 BMI1P35226 326 aa18.89■□□□□ 0.61
ZNF558-203ENST00000595786 SPCS3P61009 180 aa18.89■□□□□ 0.61
ZNF558-203ENST00000595786 FAAP20Q6NZ36 180 aa18.89■□□□□ 0.61
ZNF558-203ENST00000595786 C6orf62Q9GZU0 229 aaPredicted RBP18.89■□□□□ 0.61
ZNF558-203ENST00000595786 CACFD1Q9UGQ2 172 aa18.89■□□□□ 0.61
ZNF558-203ENST00000595786 A0A0G2JRQ6 117 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 ANKRD20A5PA0PJZ0 165 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 CRYM-AS1A6NIL9 109 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 UBE2CO00762 179 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 IGHV3-48P01763 117 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 HOXA1P49639 335 aaPredicted RBP18.88■□□□□ 0.61
ZNF558-203ENST00000595786 APOC4P55056 127 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 ZNF600Q6ZNG1 722 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 Q6ZRM9 215 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 SCGB3A2Q96PL1 93 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 RNF2Q99496 336 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 SOSTQ9BQB4 213 aa18.88■□□□□ 0.61
ZNF558-203ENST00000595786 TMEM50AO95807 157 aa18.87■□□□□ 0.61
ZNF558-203ENST00000595786 BSXQ3C1V8 233 aa18.87■□□□□ 0.61
ZNF558-203ENST00000595786 ODF3L2Q3SX64 289 aa18.87■□□□□ 0.61
ZNF558-203ENST00000595786 TOMM20LQ6UXN7 152 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms