RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 TEX50A0A1B0GTY4 177 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 C15orf62A8K5M9 175 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 MPTX1A8MV57 137 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 PFDN1O60925 122 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 FXYD4P59646 89 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 PRR20EP86478 221 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 PRR20CP86479 221 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 PRR20DP86480 221 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 PRR20BP86481 221 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 PRR20AP86496 221 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 ZNF124Q15973 351 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 ZNF818PQ6ZRF7 136 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 HOGA1Q86XE5 327 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 UBAC2Q8NBM4 344 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 C11orf45Q8TAV5 145 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 DEDD2Q8WXF8 326 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 ABHD1Q96SE0 405 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 RNF2Q99496 336 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 MFFQ9GZY8 342 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 FBXL17Q9UF56 701 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 SMPXQ9UHP9 88 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 F11RQ9Y624 299 aaKnown RBP13.68□□□□□ -0.22
PDE4C-208ENST00000595343 KIAA1109Q2LD37 5005 aa13.68□□□□□ -0.22
PDE4C-208ENST00000595343 hCG_2014768A0A024R1R8 64 aa13.67□□□□□ -0.22
PDE4C-208ENST00000595343 GABARAPH6UMI1 98 aa13.67□□□□□ -0.22
PDE4C-208ENST00000595343 PLA2G10O15496 165 aa13.67□□□□□ -0.22
PDE4C-208ENST00000595343 XRCC3O43542 346 aa13.67□□□□□ -0.22
PDE4C-208ENST00000595343 RBMS2Q15434 407 aaKnown RBP13.67□□□□□ -0.22
PDE4C-208ENST00000595343 AADACL3Q5VUY0 350 aa13.67□□□□□ -0.22
PDE4C-208ENST00000595343 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
PDE4C-208ENST00000595343 C11orf68Q9H3H3 251 aaKnown RBP13.67□□□□□ -0.22
PDE4C-208ENST00000595343 DIABLOQ9NR28 239 aa13.67□□□□□ -0.22
PDE4C-208ENST00000595343 NDUFA4L2Q9NRX3 87 aa13.67□□□□□ -0.22
PDE4C-208ENST00000595343 COMMD9Q9P000 198 aa13.67□□□□□ -0.22
PDE4C-208ENST00000595343 TRAV18A0A075B6X5 111 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 K7EIM0 57 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 LYRM1O43325 122 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 IFNA4P05014 189 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 RFX2P48378 723 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 Q56UQ5 140 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 TMEM69Q5SWH9 247 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 NRARPQ7Z6K4 114 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 DUSP18Q8NEJ0 188 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 OR11H2Q8NH07 326 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 CHAC2Q8WUX2 184 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 LSM10Q969L4 123 aaKnown RBP13.66□□□□□ -0.22
PDE4C-208ENST00000595343 ZNF414Q96IQ9 312 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 RHPN1-AS1Q9BWJ2 59 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 HINT2Q9BX68 163 aa13.66□□□□□ -0.22
PDE4C-208ENST00000595343 IGHV7-4-1A0A0J9YVY3 117 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 MARCH11A6NNE9 402 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 CHEK1O14757 476 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 FCER2P06734 321 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 CTSGP08311 255 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 TFPI2P48307 235 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 CMC4P56277 68 aaPredicted RBP13.65□□□□□ -0.22
PDE4C-208ENST00000595343 ERVK-16P61578 105 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 SSBP1Q04837 148 aaKnown RBP13.65□□□□□ -0.22
PDE4C-208ENST00000595343 TMEM17Q86X19 198 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 ENKURQ8TC29 256 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 GIMAP1Q8WWP7 306 aa13.65□□□□□ -0.22
PDE4C-208ENST00000595343 VPS13DQ5THJ4 4388 aa13.64□□□□□ -0.23
PDE4C-208ENST00000595343 CENPXA8MT69 81 aa13.64□□□□□ -0.23
PDE4C-208ENST00000595343 TAS2R20P59543 309 aa13.64□□□□□ -0.23
PDE4C-208ENST00000595343 AP3S2P59780 193 aa13.64□□□□□ -0.23
PDE4C-208ENST00000595343 TMEM116Q8NCL8 245 aa13.64□□□□□ -0.23
PDE4C-208ENST00000595343 C2CD4CQ8TF44 421 aa13.64□□□□□ -0.23
PDE4C-208ENST00000595343 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
PDE4C-208ENST00000595343 OR51B2Q9Y5P1 312 aa13.64□□□□□ -0.23
PDE4C-208ENST00000595343 IGKV3-7A0A075B6H7 116 aa13.63□□□□□ -0.23
PDE4C-208ENST00000595343 IGHV3-49A0A0A0MS15 119 aa13.63□□□□□ -0.23
PDE4C-208ENST00000595343 GNRHRP30968 328 aa13.63□□□□□ -0.23
PDE4C-208ENST00000595343 OR5AP2Q8NGF4 316 aa13.63□□□□□ -0.23
PDE4C-208ENST00000595343 FCAMRQ8WWV6 532 aa13.63□□□□□ -0.23
PDE4C-208ENST00000595343 COPZ2Q9P299 210 aa13.63□□□□□ -0.23
PDE4C-208ENST00000595343 NAP1L6A6NFF2 107 aa13.62□□□□□ -0.23
PDE4C-208ENST00000595343 DEFB4AO15263 64 aa13.62□□□□□ -0.23
PDE4C-208ENST00000595343 YIF1AO95070 293 aa13.62□□□□□ -0.23
PDE4C-208ENST00000595343 F2RP25116 425 aa13.62□□□□□ -0.23
PDE4C-208ENST00000595343 TCTAP57738 103 aa13.62□□□□□ -0.23
PDE4C-208ENST00000595343 RELQ04864 619 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-208ENST00000595343 TOMM5Q8N4H5 51 aa13.62□□□□□ -0.23
PDE4C-208ENST00000595343 OR10C1Q96KK4 312 aa13.62□□□□□ -0.23
PDE4C-208ENST00000595343 AUNIPQ9H7T9 357 aa13.62□□□□□ -0.23
PDE4C-208ENST00000595343 SCPEP1Q9HB40 452 aa13.62□□□□□ -0.23
PDE4C-208ENST00000595343 FAM240BA0A1B0GVZ2 78 aa13.61□□□□□ -0.23
PDE4C-208ENST00000595343 NUPL2O15504 423 aaKnown RBP13.61□□□□□ -0.23
PDE4C-208ENST00000595343 SNAPC5O75971 98 aa13.61□□□□□ -0.23
PDE4C-208ENST00000595343 CA1P00915 261 aaPredicted RBP13.61□□□□□ -0.23
PDE4C-208ENST00000595343 KRASP01116 189 aa13.61□□□□□ -0.23
PDE4C-208ENST00000595343 RLN1P04808 185 aa13.61□□□□□ -0.23
PDE4C-208ENST00000595343 LPAR6P43657 344 aa13.61□□□□□ -0.23
PDE4C-208ENST00000595343 HERV-K104P61576 105 aa13.61□□□□□ -0.23
PDE4C-208ENST00000595343 KLF9Q13886 244 aaPredicted RBP13.61□□□□□ -0.23
PDE4C-208ENST00000595343 FAM90A2PQ658T7 463 aa13.61□□□□□ -0.23
PDE4C-208ENST00000595343 CADM3Q8N126 398 aa13.61□□□□□ -0.23
PDE4C-208ENST00000595343 GBGT1Q8N5D6 347 aa13.61□□□□□ -0.23
PDE4C-208ENST00000595343 IGHV3OR16-13A0A075B7E8 117 aa13.6□□□□□ -0.23
PDE4C-208ENST00000595343 TRAV14DV4A0A0A6YYC5 116 aa13.6□□□□□ -0.23
PDE4C-208ENST00000595343 IGHV3-74A0A0B4J1X5 117 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms