RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 PF4V1P10720 104 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 SLC25A4P12235 298 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 PSMB8P28062 276 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 P2RY1P47900 373 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 MFAP2P55001 183 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 PROK1P58294 105 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 TPPP2P59282 170 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 FOXE3Q13461 319 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 KLK9Q2XQG4 91 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 Q5BKY6 102 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 SLC25A24Q6NUK1 477 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 TMEM65Q6PI78 240 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 C10orf99Q6UWK7 81 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 TMEM14EPQ6UXP3 125 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 OR4X2Q8NGF9 303 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 RNASEH2CQ8TDP1 164 aaKnown RBP8.47□□□□□ -1.05
USE1-204ENST00000594399 TMEM170AQ8WVE7 144 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 MISP3Q96FF7 219 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 FANCD2OSQ96PS1 177 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 THYN1Q9P016 225 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 KLK9Q9UKQ9 250 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 DMRT1Q9Y5R6 373 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 TRBV9A0A0B4J1U6 114 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 FAM24AA6NFZ4 105 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 FAM223BA6NKX1 122 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 HAX1O00165 279 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 OR2J3O76001 311 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 TRGV3P03979 118 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 ELANEP08246 267 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 METTL15P1P0C7V9 234 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 RHOGP84095 191 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 DEFA5Q01523 94 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 EXOSC2Q13868 293 aaKnown RBP8.46□□□□□ -1.06
USE1-204ENST00000594399 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 OR8G2PQ6IF36 304 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 ETV3LQ6ZN32 361 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 STX12Q86Y82 276 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 FAM223AQ8IWN6 122 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 RNF152Q8N8N0 203 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 NECAP1Q8NC96 275 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 OR5AU1Q8NGC0 362 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 WIPF2Q8TF74 440 aaPredicted RBP8.46□□□□□ -1.06
USE1-204ENST00000594399 MS4A10Q96PG2 267 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 NEURL2Q9BR09 285 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 SLC25A31Q9H0C2 315 aa8.46□□□□□ -1.06
USE1-204ENST00000594399 RPS10-NUDT3A0A1W2PQS6 291 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 IGSF23A1L1A6 192 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 PFDN1O60925 122 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 MT-CO2P00403 227 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 RPL12P30050 165 aaKnown RBP8.45□□□□□ -1.06
USE1-204ENST00000594399 NUP62P37198 522 aaPredicted RBP8.45□□□□□ -1.06
USE1-204ENST00000594399 OPRK1P41145 380 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 SULT1A1P50225 295 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 RAB9AP51151 201 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 EWSR1Q01844 656 aaKnown RBP eCLIP8.45□□□□□ -1.06
USE1-204ENST00000594399 BAXQ07812 192 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 CD300CQ08708 224 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 TMEM252Q8N6L7 170 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 PINX1Q96BK5 328 aaKnown RBP8.45□□□□□ -1.06
USE1-204ENST00000594399 FBXL7Q9UJT9 491 aa8.45□□□□□ -1.06
USE1-204ENST00000594399 A0A0G2JLM5 398 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 I3L2K1 104 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 K7EIM0 57 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 NDUFB8O95169 186 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 C1QBP02746 253 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 RPLP1P05386 114 aaKnown RBP8.44□□□□□ -1.06
USE1-204ENST00000594399 HBG1P69891 147 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 HBG2P69892 147 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 C15orf32Q32M92 178 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 AWAT1Q58HT5 328 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 ETFRF1Q6IPR1 90 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 C12orf54Q6X4T0 127 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 LCNL1Q6ZST4 164 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 ZNF546Q86UE3 836 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 INO80EQ8NBZ0 244 aaPredicted RBP8.44□□□□□ -1.06
USE1-204ENST00000594399 OR10P1Q8NGE3 313 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 MYOZ3Q8TDC0 251 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 WFDC12Q8WWY7 111 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 USMG5Q96IX5 58 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 CXorf58Q96LI9 332 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 AQP10Q96PS8 301 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 KLK15Q9H2R5 256 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 ZC4H2Q9NQZ6 224 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 TNFSF18Q9UNG2 199 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 NBEAL1Q6ZS30 2694 aa8.44□□□□□ -1.06
USE1-204ENST00000594399 IGHV3-21A0A0B4J1V1 117 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 MFSD2BA6NFX1 497 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 PMS2P5A8MQ11 134 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 PRSS46E5RG02 174 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 ARPC5O15511 151 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 CST7O76096 145 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 CD28P10747 220 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 ATP5G2Q06055 141 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 CD69Q07108 199 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 SLC38A11Q08AI6 406 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 ZFP69Q49AA0 526 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 TCTEX1D4Q5JR98 221 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 KHDC1LQ5JSQ8 128 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 ACOT7LQ6ZUV0 252 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 SLC16A13Q7RTY0 426 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms