RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ZNF436Q9C0F3 470 aaPredicted RBP10.94□□□□□ -0.66
PNKP-202ENST00000593706 RBM38Q9H0Z9 239 aaKnown RBP10.94□□□□□ -0.66
PNKP-202ENST00000593706 DAZ1Q9NQZ3 744 aaKnown RBP10.94□□□□□ -0.66
PNKP-202ENST00000593706 F11RQ9Y624 299 aaKnown RBP10.94□□□□□ -0.66
PNKP-202ENST00000593706 OR4C46A6NHA9 309 aa10.93□□□□□ -0.66
PNKP-202ENST00000593706 TSPAN4O14817 238 aa10.93□□□□□ -0.66
PNKP-202ENST00000593706 GSTZ1O43708 216 aaPredicted RBP10.93□□□□□ -0.66
PNKP-202ENST00000593706 RAB3DO95716 219 aa10.93□□□□□ -0.66
PNKP-202ENST00000593706 RPL35AP18077 110 aaKnown RBP10.93□□□□□ -0.66
PNKP-202ENST00000593706 VN1R17PQ8TDU5 208 aa10.93□□□□□ -0.66
PNKP-202ENST00000593706 DIRAS2Q96HU8 199 aa10.93□□□□□ -0.66
PNKP-202ENST00000593706 ZNF414Q96IQ9 312 aa10.93□□□□□ -0.66
PNKP-202ENST00000593706 TSC22D3Q99576 134 aa10.93□□□□□ -0.66
PNKP-202ENST00000593706 C20orf24Q9BUV8 137 aa10.93□□□□□ -0.66
PNKP-202ENST00000593706 KIR2DL5BA0A0G2JN68 375 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 KIR2DL5BA0A0G2JPC4 375 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 K7EIM0 57 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 SNAPC5O75971 98 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 PGAM2P15259 253 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 IZUMO4Q1ZYL8 232 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 ODF3L2Q3SX64 289 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 KIR2DL5AQ8N109 375 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 UBAC2Q8NBM4 344 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 ZNF114Q8NC26 417 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 OR4C16Q8NGL9 310 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 KIR2DL5BQ8NHK3 375 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 MARCH1Q8TCQ1 289 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 RNF183Q96D59 192 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 BSCL2Q96G97 398 aaPredicted RBP10.92□□□□□ -0.66
PNKP-202ENST00000593706 C6orf62Q9GZU0 229 aaPredicted RBP10.92□□□□□ -0.66
PNKP-202ENST00000593706 FKBP11Q9NYL4 201 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 RABL2AQ9UBK7 228 aaPredicted RBP10.92□□□□□ -0.66
PNKP-202ENST00000593706 RABL2BQ9UNT1 228 aa10.92□□□□□ -0.66
PNKP-202ENST00000593706 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 A0A0B4J293 547 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 ANKRD20A5PA0PJZ0 165 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 CTSDP07339 412 aaPredicted RBP10.91□□□□□ -0.66
PNKP-202ENST00000593706 ATF4P18848 351 aaPredicted RBP10.91□□□□□ -0.66
PNKP-202ENST00000593706 UCP1P25874 307 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 TNFSF8P32971 234 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 PRCDQ00LT1 54 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 IL18Q14116 193 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 MEF2DQ14814 521 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 SLC25A24Q6NUK1 477 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 SPSB3Q6PJ21 355 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 H2BFWTQ7Z2G1 175 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 RPP25LQ8N5L8 163 aaKnown RBP10.91□□□□□ -0.66
PNKP-202ENST00000593706 ATP6V0BQ99437 205 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 RTBDNQ9BSG5 229 aaPredicted RBP10.91□□□□□ -0.66
PNKP-202ENST00000593706 HINT2Q9BX68 163 aa10.91□□□□□ -0.66
PNKP-202ENST00000593706 IGHV3-21A0A0B4J1V1 117 aa10.9□□□□□ -0.66
PNKP-202ENST00000593706 C3orf85A0A1B0GTC6 90 aa10.9□□□□□ -0.66
PNKP-202ENST00000593706 NDUFA4O00483 81 aa10.9□□□□□ -0.66
PNKP-202ENST00000593706 ZNF207O43670 478 aaKnown RBP10.9□□□□□ -0.66
PNKP-202ENST00000593706 SURF2Q15527 256 aaPredicted RBP10.9□□□□□ -0.66
PNKP-202ENST00000593706 SCGB2B2Q4G0G5 96 aa10.9□□□□□ -0.66
PNKP-202ENST00000593706 OR1P1Q8NH06 330 aa10.9□□□□□ -0.66
PNKP-202ENST00000593706 ZFAND1Q8TCF1 268 aa10.9□□□□□ -0.66
PNKP-202ENST00000593706 PHLDA1Q8WV24 401 aaPredicted RBP10.9□□□□□ -0.66
PNKP-202ENST00000593706 GALNT14Q96FL9 552 aa10.9□□□□□ -0.66
PNKP-202ENST00000593706 TMEM56Q96MV1 263 aa10.9□□□□□ -0.66
PNKP-202ENST00000593706 A0A0G2JRQ6 117 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 INS-IGF2F8WCM5 200 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 NOL3O60936 208 aaKnown RBP10.89□□□□□ -0.67
PNKP-202ENST00000593706 DEDDO75618 318 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 B3GALNT1O75752 331 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 AKAIN1P0CW23 69 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 FCGR2BP31994 310 aaPredicted RBP10.89□□□□□ -0.67
PNKP-202ENST00000593706 ADMP35318 185 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 HSPE1P61604 102 aaKnown RBP10.89□□□□□ -0.67
PNKP-202ENST00000593706 SP6Q3SY56 376 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 AARDQ4LEZ3 155 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 Q56UQ5 140 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 PVRIGQ6DKI7 326 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 OR4A16Q8NH70 328 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 MCFD2Q8NI22 146 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 SCARB1Q8WTV0 552 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 TRIM63Q969Q1 353 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 TMEM222Q9H0R3 208 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 C21orf62Q9NYP8 219 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 RSL24D1Q9UHA3 163 aaKnown RBP10.89□□□□□ -0.67
PNKP-202ENST00000593706 V9GYH0 126 aa10.89□□□□□ -0.67
PNKP-202ENST00000593706 VPS13DQ5THJ4 4388 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 DNAH6Q9C0G6 4158 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 I3L2K1 104 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 APRG1Q8IVJ8 170 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 CCDC71LQ8N9Z2 235 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 OR51S1Q8NGJ8 323 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 LHFPL5Q8TAF8 219 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 GLYATL2Q8WU03 294 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 CHRDL1Q9BU40 450 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 MAP6D1Q9H9H5 199 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 COPZ2Q9P299 210 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 GPR132Q9UNW8 380 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 HERC2O95714 4834 aa10.88□□□□□ -0.67
PNKP-202ENST00000593706 CRYM-AS1A6NIL9 109 aa10.87□□□□□ -0.67
PNKP-202ENST00000593706 DISC1C4P0D8 188 aa10.87□□□□□ -0.67
PNKP-202ENST00000593706 ST8SIA3O43173 380 aa10.87□□□□□ -0.67
PNKP-202ENST00000593706 CDS2O95674 445 aa10.87□□□□□ -0.67
PNKP-202ENST00000593706 ZNF79Q15937 498 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms