RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ZNF83P51522 516 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 TAS2R45P59539 299 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 ODF1Q14990 250 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 MSMPQ1L6U9 139 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 FAM169BQ8N8A8 192 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 IGF2BP2-AS1Q96M15 143 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 DSCAMO60469 2012 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 BMPR1BO00238 502 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 CD59P13987 128 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 AMTP48728 403 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 KIAA1644Q3SXP7 199 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 ZNF439Q8NDP4 499 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 RCHY1Q96PM5 261 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 PLEKHA3Q9HB20 300 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 TECTAO75443 2155 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 ZDBF2Q9HCK1 2354 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 UPK2O00526 184 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 SPINK4O60575 86 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 FXYD3Q14802 87 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 C2orf83Q53S99 150 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 IBA57Q5T440 356 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 TNCP24821 2201 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 TANC2Q9HCD6 1990 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 OR7C2O60412 319 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 ZNF324O75467 553 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 PPBPP02775 128 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 SUMO1P63165 101 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 SPRNQ5BIV9 151 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 MOB3BQ86TA1 216 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 ZNF430Q9H8G1 570 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 PRRX1P54821 245 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 COL5A1-AS1Q5SY13 56 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 OR2V2Q96R30 315 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 SLC25A33Q9BSK2 321 aa12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 ZNF71Q9NQZ8 489 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-219ENST00000592604 C20orf202A1L168 122 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 IZUMO1RA6ND01 250 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 PRR33A8MZF0 331 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 SLC25A17O43808 307 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 C8orf88P0DMB2 117 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 SRIP30626 198 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 PTTG1IPP53801 180 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 MOGAT3Q86VF5 341 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 NIT1Q86X76 327 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 CDC42EP3Q9UKI2 254 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 INTS1Q8N201 2190 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 J3KRW8 73 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 GATA2P23769 480 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 SLC35B1P78383 322 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 SPATA45Q537H7 98 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 C11orf42Q8N5U0 333 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 FAM222BQ8WU58 562 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 COMMD5Q9GZQ3 224 aa12.12□□□□□ -0.47
SMARCA4-219ENST00000592604 NKX6-3A6NJ46 265 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 TCL1AP56279 114 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 NHLH1Q02575 133 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 OR1L8Q8NGR8 309 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 UQCR10Q9UDW1 63 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 SLC25A15Q9Y619 301 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 TEX50A0A1B0GTY4 177 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 PCNX2A6NKB5 2137 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 C19orf35Q6ZS72 473 aa12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 WIPF2Q8TF74 440 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 MRPL27Q9P0M9 148 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-219ENST00000592604 C3orf79P0CE67 100 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 PMCHP20382 165 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 BATFQ16520 125 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 MRPL54Q6P161 138 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 BHLHA15Q7RTS1 189 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 TSKUQ8WUA8 353 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 STARD4Q96DR4 205 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 LINC00574Q9H8X3 128 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 GCM1Q9NP62 436 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 PSMB11A5LHX3 300 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 K7EP13 123 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 APCSP02743 223 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 IGLC2P0DOY2 106 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 IGLC3P0DOY3 106 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 RNASE2P10153 161 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 FAM167A-AS1Q96KT0 104 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 DKK4Q9UBT3 224 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 ZFP30Q9Y2G7 519 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 CCL25O15444 150 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 CT45A6P0DMU7 189 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 CT45A5P0DMU8 189 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 CT45A7P0DMV0 189 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 MGST1P10620 155 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 CD69Q07108 199 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 DHRS13Q6UX07 377 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 OR5B3Q8NH48 314 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 OR9G1Q8NH87 305 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 SARAFQ96BY9 339 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 MBD6Q96DN6 1003 aa12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 ALKBH7Q9BT30 221 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-219ENST00000592604 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms