RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ZNF114Q8NC26 417 aa8.49□□□□□ -1.05
SMAD4-211ENST00000590499 OR4A16Q8NH70 328 aa8.49□□□□□ -1.05
SMAD4-211ENST00000590499 LHFPL5Q8TAF8 219 aa8.49□□□□□ -1.05
SMAD4-211ENST00000590499 GLYATL2Q8WU03 294 aa8.49□□□□□ -1.05
SMAD4-211ENST00000590499 TMEM56Q96MV1 263 aa8.49□□□□□ -1.05
SMAD4-211ENST00000590499 TMEM222Q9H0R3 208 aa8.49□□□□□ -1.05
SMAD4-211ENST00000590499 NAA60Q9H7X0 242 aa8.49□□□□□ -1.05
SMAD4-211ENST00000590499 THYN1Q9P016 225 aa8.49□□□□□ -1.05
SMAD4-211ENST00000590499 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
SMAD4-211ENST00000590499 CRYM-AS1A6NIL9 109 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 C2orf70A6NJV1 201 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 A8MWP6 167 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 K7EIM0 57 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 CYB5BO43169 146 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 CDS2O95674 445 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 CLEC3BP05452 202 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 OR5AC1P0C628 307 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 EDN2P20800 178 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 GPR183P32249 361 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 ETV6P41212 452 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 TRIM16LQ309B1 348 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 AARDQ4LEZ3 155 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 C11orf87Q6NUJ2 197 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 SLC25A24Q6NUK1 477 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 Q8N1Y9 231 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 OR1P1Q8NH06 330 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 TMEM230Q96A57 120 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 ATP6V0BQ99437 205 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 C14orf166Q9Y224 244 aaKnown RBP8.48□□□□□ -1.05
SMAD4-211ENST00000590499 SMAD5-AS1Q9Y6J3 95 aa8.48□□□□□ -1.05
SMAD4-211ENST00000590499 TMEM213A2RRL7 107 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 INS-IGF2F8WCM5 200 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 ATG12O94817 140 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 FOLR2P14207 255 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 S100A5P33763 92 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 AKR1C2P52895 323 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 UNQ9165/PRO28630Q6UXU0 137 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 Q6ZRM9 215 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 Q8N402 240 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 OR1L6Q8NGR2 347 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 OR2K2Q8NGT1 345 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 SCARB1Q8WTV0 552 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 ZNF414Q96IQ9 312 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 SCP2D1Q9UJQ7 156 aa8.47□□□□□ -1.05
SMAD4-211ENST00000590499 TEX13DA0A0J9YY54 714 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-211ENST00000590499 I3L2K1 104 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 ST8SIA3O43173 380 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 TGOLN2O43493 480 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 VAMP1P23763 118 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 DHODHQ02127 395 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 CD300EQ496F6 205 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-211ENST00000590499 FAM106AQ4KMX7 169 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 PYDC2Q56P42 97 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 LCN12Q6JVE5 192 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 FAM219AQ8IW50 185 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 SELENOHQ8IZQ5 122 aaKnown RBP8.46□□□□□ -1.06
SMAD4-211ENST00000590499 RBPMSQ93062 196 aaKnown RBP8.46□□□□□ -1.06
SMAD4-211ENST00000590499 GALNT14Q96FL9 552 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 ZNF436Q9C0F3 470 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-211ENST00000590499 SRRQ9GZT4 340 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 PLEKHA3Q9HB20 300 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 ZC4H2Q9NQZ6 224 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 MCUBQ9NWR8 336 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 C21orf62Q9NYP8 219 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
SMAD4-211ENST00000590499 IGHV3-21A0A0B4J1V1 117 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 OR2T8A6NH00 312 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 A8MZ25 164 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 NHLRC4P0CG21 123 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-211ENST00000590499 CBLN1P23435 193 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 FCGR2BP31994 310 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-211ENST00000590499 SUPT4H1P63272 117 aaKnown RBP8.45□□□□□ -1.06
SMAD4-211ENST00000590499 TMEM187Q14656 261 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 SPINK9Q5DT21 86 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 PLET1Q6UQ28 207 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 DEDD2Q8WXF8 326 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 CACNG8Q8WXS5 425 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 TMEM190Q8WZ59 177 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 RRNAD1Q96FB5 475 aaKnown RBP8.45□□□□□ -1.06
SMAD4-211ENST00000590499 BSCL2Q96G97 398 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-211ENST00000590499 SCGB3A2Q96PL1 93 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 CHRDL1Q9BU40 450 aa8.45□□□□□ -1.06
SMAD4-211ENST00000590499 TECRQ9NZ01 308 aaKnown RBP8.45□□□□□ -1.06
SMAD4-211ENST00000590499 NBEAL2Q6ZNJ1 2754 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 IGHV3-35A0A0C4DH35 117 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 ZNF320A2RRD8 509 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 ZNF785A8K8V0 405 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 FRMD6-AS1P0C7T7 363 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 C8orf88P0DMB2 117 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 IGHV4-30-4P0DP06 118 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 FAUP35544 74 aaKnown RBP8.44□□□□□ -1.06
SMAD4-211ENST00000590499 ELLP55199 621 aaPredicted RBP8.44□□□□□ -1.06
SMAD4-211ENST00000590499 AP3S2P59780 193 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 ERHP84090 104 aaKnown RBP8.44□□□□□ -1.06
SMAD4-211ENST00000590499 BSXQ3C1V8 233 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 SPANXN2Q5MJ10 180 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 TMEM268Q5VZI3 342 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms