RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 NOTCH1P46531 2555 aa16.37■□□□□ 0.21
ATG4D-212ENST00000590096 PPP5D1E7EU14 171 aa16.36■□□□□ 0.21
ATG4D-212ENST00000590096 BMPR1BO00238 502 aa16.36■□□□□ 0.21
ATG4D-212ENST00000590096 IFNA21P01568 189 aa16.36■□□□□ 0.21
ATG4D-212ENST00000590096 ARL3P36405 182 aa16.36■□□□□ 0.21
ATG4D-212ENST00000590096 TNFRSF9Q07011 255 aa16.36■□□□□ 0.21
ATG4D-212ENST00000590096 TATDN3Q17R31 274 aa16.36■□□□□ 0.21
ATG4D-212ENST00000590096 C9orf66Q5T8R8 295 aa16.36■□□□□ 0.21
ATG4D-212ENST00000590096 GGNBP1Q5YKI7 109 aa16.36■□□□□ 0.21
ATG4D-212ENST00000590096 ZNF502Q8TBZ5 544 aa16.36■□□□□ 0.21
ATG4D-212ENST00000590096 IGHV3-21A0A0B4J1V1 117 aa16.35■□□□□ 0.21
ATG4D-212ENST00000590096 GGCTO75223 188 aaKnown RBP16.35■□□□□ 0.21
ATG4D-212ENST00000590096 BEAN1Q3B7T3 259 aa16.35■□□□□ 0.21
ATG4D-212ENST00000590096 OR52B4Q8NGK2 314 aa16.35■□□□□ 0.21
ATG4D-212ENST00000590096 PINX1Q96BK5 328 aaKnown RBP16.35■□□□□ 0.21
ATG4D-212ENST00000590096 HIPK2Q9H2X6 1198 aa16.35■□□□□ 0.21
ATG4D-212ENST00000590096 HSPB7Q9UBY9 170 aa16.35■□□□□ 0.21
ATG4D-212ENST00000590096 K7EIM0 57 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 CORTO00230 105 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 CLEC3BP05452 202 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 RNASE2P10153 161 aaKnown RBP16.34■□□□□ 0.21
ATG4D-212ENST00000590096 GPR183P32249 361 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 HTR2BP41595 481 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 SYNJ2BPP57105 145 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 KLF5Q13887 457 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-212ENST00000590096 SCARB1Q8WTV0 552 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 MITD1Q8WV92 249 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 ELOVL1Q9BW60 279 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 C21orf62Q9NYP8 219 aa16.34■□□□□ 0.21
ATG4D-212ENST00000590096 PITX3O75364 302 aa16.33■□□□□ 0.2
ATG4D-212ENST00000590096 ADAP1O75689 374 aa16.33■□□□□ 0.2
ATG4D-212ENST00000590096 KPRPQ5T749 579 aaPredicted RBP16.33■□□□□ 0.2
ATG4D-212ENST00000590096 DTD1Q8TEA8 209 aa16.33■□□□□ 0.2
ATG4D-212ENST00000590096 RBKSQ9H477 322 aa16.33■□□□□ 0.2
ATG4D-212ENST00000590096 FAM90A26D6RGX4 464 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 I3L2K1 104 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 SAP30O75446 220 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 MT-CO2P00403 227 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 INSL3P51460 131 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 Q56UQ5 140 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 ACSM6Q6P461 480 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 PLET1Q6UQ28 207 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 NRARPQ7Z6K4 114 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 UBAC2Q8NBM4 344 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 DUSP18Q8NEJ0 188 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 SLC24A4Q8NFF2 622 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 ZNF431Q8TF32 576 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-212ENST00000590096 ATP6V0BQ99437 205 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 SEC22CQ9BRL7 303 aa16.32■□□□□ 0.2
ATG4D-212ENST00000590096 MED6O75586 246 aa16.31■□□□□ 0.2
ATG4D-212ENST00000590096 OR2C1O95371 312 aa16.31■□□□□ 0.2
ATG4D-212ENST00000590096 DEFA6Q01524 100 aa16.31■□□□□ 0.2
ATG4D-212ENST00000590096 BSXQ3C1V8 233 aa16.31■□□□□ 0.2
ATG4D-212ENST00000590096 NOXA1Q86UR1 476 aa16.31■□□□□ 0.2
ATG4D-212ENST00000590096 OR9G4Q8NGQ1 327 aa16.31■□□□□ 0.2
ATG4D-212ENST00000590096 BSCL2Q96G97 398 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-212ENST00000590096 OR4C12Q96R67 309 aa16.31■□□□□ 0.2
ATG4D-212ENST00000590096 ZC4H2Q9NQZ6 224 aa16.31■□□□□ 0.2
ATG4D-212ENST00000590096 GAR1Q9NY12 217 aaKnown RBP16.31■□□□□ 0.2
ATG4D-212ENST00000590096 PEMTQ9UBM1 199 aa16.31■□□□□ 0.2
ATG4D-212ENST00000590096 ZMAT5Q9UDW3 170 aaKnown RBP16.31■□□□□ 0.2
ATG4D-212ENST00000590096 OR2T8A6NH00 312 aa16.3■□□□□ 0.2
ATG4D-212ENST00000590096 TGOLN2O43493 480 aa16.3■□□□□ 0.2
ATG4D-212ENST00000590096 MFAP4P55083 255 aa16.3■□□□□ 0.2
ATG4D-212ENST00000590096 C2orf83Q53S99 150 aa16.3■□□□□ 0.2
ATG4D-212ENST00000590096 PVRIGQ6DKI7 326 aa16.3■□□□□ 0.2
ATG4D-212ENST00000590096 UXS1Q8NBZ7 420 aa16.3■□□□□ 0.2
ATG4D-212ENST00000590096 U3KQ87 197 aa16.3■□□□□ 0.2
ATG4D-212ENST00000590096 IFNA10P01566 189 aa16.29■□□□□ 0.2
ATG4D-212ENST00000590096 NPY1RP25929 384 aa16.29■□□□□ 0.2
ATG4D-212ENST00000590096 OPRK1P41145 380 aa16.29■□□□□ 0.2
ATG4D-212ENST00000590096 FAM106AQ4KMX7 169 aa16.29■□□□□ 0.2
ATG4D-212ENST00000590096 SPSB3Q6PJ21 355 aa16.29■□□□□ 0.2
ATG4D-212ENST00000590096 GPHB5Q86YW7 130 aa16.29■□□□□ 0.2
ATG4D-212ENST00000590096 C12orf45Q8N5I9 185 aaPredicted RBP16.29■□□□□ 0.2
ATG4D-212ENST00000590096 TXN2Q99757 166 aa16.29■□□□□ 0.2
ATG4D-212ENST00000590096 IL5P05113 134 aa16.28■□□□□ 0.2
ATG4D-212ENST00000590096 EGFEM1PQ0D2K5 195 aa16.28■□□□□ 0.2
ATG4D-212ENST00000590096 GPN1Q9HCN4 374 aaPredicted RBP16.28■□□□□ 0.2
ATG4D-212ENST00000590096 RPS10-NUDT3A0A1W2PQS6 291 aa16.27■□□□□ 0.2
ATG4D-212ENST00000590096 MPTX1A8MV57 137 aa16.27■□□□□ 0.2
ATG4D-212ENST00000590096 INMT-MINDY4F8WBC2 141 aa16.27■□□□□ 0.2
ATG4D-212ENST00000590096 IGHV3-48P01763 117 aa16.27■□□□□ 0.2
ATG4D-212ENST00000590096 IAPPP10997 89 aa16.27■□□□□ 0.2
ATG4D-212ENST00000590096 FCGR2BP31994 310 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-212ENST00000590096 IAH1Q2TAA2 248 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-212ENST00000590096 C11orf87Q6NUJ2 197 aa16.27■□□□□ 0.2
ATG4D-212ENST00000590096 RNASEH2CQ8TDP1 164 aaKnown RBP16.27■□□□□ 0.2
ATG4D-212ENST00000590096 CIB3Q96Q77 187 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-212ENST00000590096 MAGT1Q9H0U3 335 aa16.27■□□□□ 0.2
ATG4D-212ENST00000590096 ZNF320A2RRD8 509 aa16.26■□□□□ 0.19
ATG4D-212ENST00000590096 F8W735 103 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-212ENST00000590096 LGALS9O00182 355 aa16.26■□□□□ 0.19
ATG4D-212ENST00000590096 NUPL2O15504 423 aaKnown RBP16.26■□□□□ 0.19
ATG4D-212ENST00000590096 SYNGR2O43760 224 aa16.26■□□□□ 0.19
ATG4D-212ENST00000590096 GNG7O60262 68 aa16.26■□□□□ 0.19
ATG4D-212ENST00000590096 NPBWR1P48145 328 aa16.26■□□□□ 0.19
ATG4D-212ENST00000590096 ATP5IP56385 69 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-212ENST00000590096 REC114Q7Z4M0 266 aa16.26■□□□□ 0.19
ATG4D-212ENST00000590096 IGHV3-35A0A0C4DH35 117 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms