RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 IL3RAP26951 378 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 CHRNA7P36544 502 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 ZNF134P52741 427 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 OR4S2Q8NH73 311 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 C14orf144Q96I85 54 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 FAM234AQ9H0X4 552 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 PATZ1Q9HBE1 687 aaKnown RBP11.88□□□□□ -0.51
CCDC43-203ENST00000588210 CALYQ9NYX4 217 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 TCF19Q9Y242 345 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 LSM4Q9Y4Z0 139 aaKnown RBP11.88□□□□□ -0.51
CCDC43-203ENST00000588210 TRAV3A0A0B4J244 114 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 IGHV4-61A0A0C4DH41 118 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 C15orf61A6NNL5 157 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 NDUFB4O95168 129 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 GZMBP10144 247 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 IRF2P14316 349 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 DDTP30046 118 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 RAB7AP51149 207 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 FAM78BQ5VT40 261 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 VKORC1L1Q8N0U8 176 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 MAPK1IP1LQ8NDC0 245 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 DERL1Q9BUN8 251 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 DCAF16Q9NXF7 216 aa11.88□□□□□ -0.51
CCDC43-203ENST00000588210 IGHV3OR15-7A0A075B7D8 119 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 CGB3P0DN86 165 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 CGB7P0DN87 165 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 RPL15P61313 204 aaKnown RBP11.87□□□□□ -0.51
CCDC43-203ENST00000588210 MIC13Q5XKP0 118 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 REC114Q7Z4M0 266 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.87□□□□□ -0.51
CCDC43-203ENST00000588210 RAB9BQ9NP90 201 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 SLC31A2O15432 143 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 FSTL3O95633 263 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 GCGP01275 180 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 FOXL1Q12952 345 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 OR5T1Q8NG75 326 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 TMEM37Q8WXS4 190 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 RHOVQ96L33 236 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 NPVFQ9HCQ7 196 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 RNF7Q9UBF6 113 aa11.87□□□□□ -0.51
CCDC43-203ENST00000588210 FOXA2Q9Y261 457 aaPredicted RBP11.87□□□□□ -0.51
CCDC43-203ENST00000588210 HIVEP1P15822 2718 aa11.86□□□□□ -0.51
CCDC43-203ENST00000588210 CR1P17927 2039 aa11.86□□□□□ -0.51
CCDC43-203ENST00000588210 FLNAP21333 2647 aaKnown RBP11.86□□□□□ -0.51
CCDC43-203ENST00000588210 LHBP01229 141 aa11.86□□□□□ -0.51
CCDC43-203ENST00000588210 ABHD12Q8N2K0 398 aa11.86□□□□□ -0.51
CCDC43-203ENST00000588210 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
CCDC43-203ENST00000588210 ZNRF1Q8ND25 227 aa11.86□□□□□ -0.51
CCDC43-203ENST00000588210 C1orf159Q96HA4 380 aa11.86□□□□□ -0.51
CCDC43-203ENST00000588210 MED13LQ71F56 2210 aa11.86□□□□□ -0.51
CCDC43-203ENST00000588210 THBS3P49746 956 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 CNN1P51911 297 aaKnown RBP11.85□□□□□ -0.51
CCDC43-203ENST00000588210 C17orf58Q2M2W7 97 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 TMEM155Q4W5P6 130 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 C1orf229Q6ZS94 237 aaPredicted RBP11.85□□□□□ -0.51
CCDC43-203ENST00000588210 TMEM18Q96B42 140 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 SFRP2Q96HF1 295 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 PRO1933Q9H354 126 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 F8P00451 2351 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 TRBV20OR9-2A0A075B6H5 130 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 PPIAL4EA0A075B759 164 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 PPIAL4DF5H284 164 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 IL6RP08887 468 aaPredicted RBP11.85□□□□□ -0.51
CCDC43-203ENST00000588210 PPIAL4FP0DN26 164 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 NPY1RP25929 384 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 ARSJQ5FYB0 599 aaPredicted RBP11.85□□□□□ -0.51
CCDC43-203ENST00000588210 SLC24A4Q8NFF2 622 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 SDSLQ96GA7 329 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 TMEM14BQ9NUH8 114 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 PPIAL4AQ9Y536 164 aa11.85□□□□□ -0.51
CCDC43-203ENST00000588210 A0A087X0M5 115 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 SAA2-SAA4A0A096LPE2 208 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 A0A1B0GX30 115 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 SAA2P0DJI9 122 aaPredicted RBP11.84□□□□□ -0.51
CCDC43-203ENST00000588210 GCHFRP30047 84 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 POU2AF1Q16633 256 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 CT45A1Q5HYN5 189 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 OR4A47Q6IF82 309 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 TEPPQ6URK8 271 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 CT45A3Q8NHU0 189 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 ADTRPQ96IZ2 230 aa11.84□□□□□ -0.51
CCDC43-203ENST00000588210 AURKAIP1Q9NWT8 199 aaPredicted RBP11.84□□□□□ -0.51
CCDC43-203ENST00000588210 A0A0U1RQK1 487 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 ZNF320A2RRD8 509 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 PGPEP1LA6NFU8 196 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 FNDC10F2Z333 226 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 IGHV3-7P01780 117 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.51
CCDC43-203ENST00000588210 RHOBP62745 196 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 STPG3Q8N7X2 389 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 C11orf52Q96A22 123 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 SMR3AQ99954 134 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 YTHDF2Q9Y5A9 579 aaKnown RBP11.83□□□□□ -0.51
CCDC43-203ENST00000588210 TRAPPC1Q9Y5R8 145 aa11.83□□□□□ -0.51
CCDC43-203ENST00000588210 ACANP16112 2415 aa11.83□□□□□ -0.52
CCDC43-203ENST00000588210 YLPM1P49750 1951 aaKnown RBP11.83□□□□□ -0.52
CCDC43-203ENST00000588210 KBTBD11-OT1A0A1B0GTJ5 212 aa11.83□□□□□ -0.52
CCDC43-203ENST00000588210 RPL29P47914 159 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms