RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 HIVEP1P15822 2718 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 F8P00451 2351 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 FXYD6-FXYD2A0A087WZ82 144 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 E5RGE8 158 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 H3BP45 60 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 ATP6V0E1O15342 81 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 DEDDO75618 318 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 MPC2O95563 127 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 IFNA10P01566 189 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 AMY1AP04745 511 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 REG1AP05451 166 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 OR8U8P0C7N1 319 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 OR13C7P0DN81 318 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 DEFA4P12838 97 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 CAV2P51636 162 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 SUB1P53999 127 aaKnown RBP eCLIP4.18□□□□□ -1.74
LIG3-210ENST00000588109 UBA52P62987 128 aaKnown RBP4.18□□□□□ -1.74
LIG3-210ENST00000588109 RPP30P78346 268 aaKnown RBP4.18□□□□□ -1.74
LIG3-210ENST00000588109 NDPQ00604 133 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 TMEM267Q0VDI3 215 aaPredicted RBP4.18□□□□□ -1.74
LIG3-210ENST00000588109 IL15RAQ13261 267 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 MRGPRG-AS1Q2M3A8 158 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 ZFP69Q49AA0 526 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 AARDQ4LEZ3 155 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 SPANXN5Q5MJ07 72 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 C11orf87Q6NUJ2 197 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 PRSS54Q6PEW0 395 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 UNQ5815/PRO19632Q6UWF5 114 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 HSD17B13Q7Z5P4 300 aaPredicted RBP4.18□□□□□ -1.74
LIG3-210ENST00000588109 TCTE3Q8IZS6 198 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 LFNGQ8NES3 379 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 SLC24A4Q8NFF2 622 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 OR10W1Q8NGF6 305 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 SGMS2Q8NHU3 365 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 ST6GAL2Q96JF0 529 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 SRSF8Q9BRL6 282 aaKnown RBP4.18□□□□□ -1.74
LIG3-210ENST00000588109 NDUFA4L2Q9NRX3 87 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 PSENENQ9NZ42 101 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 OR5AC2Q9NZP5 309 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 MBD2Q9UBB5 411 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 WSB1Q9Y6I7 421 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 ZFHX3Q15911 3703 aa4.18□□□□□ -1.74
LIG3-210ENST00000588109 TRAV14DV4A0A0A6YYC5 116 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 TRAV41A0A0B4J266 112 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 IGLC7A0M8Q6 106 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 CGB1A6NKQ9 187 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 LINC01548A6NM66 108 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 TEX22C9J3V5 150 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 E7EUB6 86 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 H0YIZ8 118 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 AP4M1O00189 453 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 ARPC5O15511 151 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 CYB5BO43169 146 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 TSC22D2O75157 780 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 IGHG2P01859 326 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 IFNA4P05014 189 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 SLC25A4P12235 298 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 AREGP15514 252 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 NPY1RP25929 384 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 HTR2BP41595 481 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 VDAC2P45880 294 aaPredicted RBP4.17□□□□□ -1.74
LIG3-210ENST00000588109 P2RY1P47900 373 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 TAS2R30P59541 319 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 RPL15P61313 204 aaKnown RBP4.17□□□□□ -1.74
LIG3-210ENST00000588109 RAB11AP62491 216 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 SLC35B1P78383 322 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 SSBP2P81877 361 aaPredicted RBP4.17□□□□□ -1.74
LIG3-210ENST00000588109 WT1-ASQ06250 92 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 CD300CQ08708 224 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 PDLIM3Q53GG5 364 aaPredicted RBP4.17□□□□□ -1.74
LIG3-210ENST00000588109 Q5BKY6 102 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 NOXA1Q86UR1 476 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 STX12Q86Y82 276 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 INO80EQ8NBZ0 244 aaPredicted RBP4.17□□□□□ -1.74
LIG3-210ENST00000588109 OR5T1Q8NG75 326 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 OR2T6Q8NHC8 308 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 SMIM8Q96KF7 97 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 TMEM68Q96MH6 324 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 NEURL2Q9BR09 285 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 RNF126Q9BV68 326 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 GON7Q9BXV9 100 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 SLC25A31Q9H0C2 315 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 ZNF702PQ9H963 129 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 ZNF355PQ9NSJ1 428 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 LINC00527Q9UJ94 153 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 STRAPQ9Y3F4 350 aaKnown RBP4.17□□□□□ -1.74
LIG3-210ENST00000588109 FBXO7Q9Y3I1 522 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 U3KQ87 197 aa4.17□□□□□ -1.74
LIG3-210ENST00000588109 TET2Q6N021 2002 aaPredicted RBP4.16□□□□□ -1.74
LIG3-210ENST00000588109 A0A1B0GW64 132 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 GAGE12BA1L429 117 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 GAGE12HA6NDE8 117 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 FAM24AA6NFZ4 105 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 NPIPB5A8MRT5 1133 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 INS-IGF2F8WCM5 200 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 G3V318 75 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 CST7O76096 145 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 TNFRSF6BO95407 300 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 TMEM50AO95807 157 aa4.16□□□□□ -1.74
LIG3-210ENST00000588109 C1QBP02746 253 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms