RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CHRDL1Q9BU40 450 aa11.11□□□□□ -0.63
VAPA-209ENST00000585042 MAP6D1Q9H9H5 199 aa11.11□□□□□ -0.63
VAPA-209ENST00000585042 UBQLN2Q9UHD9 624 aa11.11□□□□□ -0.63
VAPA-209ENST00000585042 SMPXQ9UHP9 88 aa11.11□□□□□ -0.63
VAPA-209ENST00000585042 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
VAPA-209ENST00000585042 FABP12A6NFH5 140 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 F8W735 103 aaPredicted RBP11.1□□□□□ -0.63
VAPA-209ENST00000585042 K7EIM0 57 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 GPR31O00270 319 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 CTDSPLO15194 276 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 KRASP01116 189 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 CD5P06127 495 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 CTSGP08311 255 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 RPA2P15927 270 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 ADMP35318 185 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 MFAP2P55001 183 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 PMS2P11Q13670 270 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 TMEM229BQ8NBD8 167 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 OR1P1Q8NH06 330 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 OR10C1Q96KK4 312 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 C20orf24Q9BUV8 137 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 NXF2Q9GZY0 626 aaKnown RBP11.1□□□□□ -0.63
VAPA-209ENST00000585042 TMEM14BQ9NUH8 114 aa11.1□□□□□ -0.63
VAPA-209ENST00000585042 M0QYG6 137 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 NUPL2O15504 423 aaKnown RBP11.09□□□□□ -0.63
VAPA-209ENST00000585042 CD3DP04234 171 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 RLN1P04808 185 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 CTSDP07339 412 aaPredicted RBP11.09□□□□□ -0.63
VAPA-209ENST00000585042 TNFSF8P32971 234 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 UCP3P55916 312 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 EWSR1Q01844 656 aaKnown RBP eCLIP11.09□□□□□ -0.63
VAPA-209ENST00000585042 MEF2DQ14814 521 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 Q56UQ5 140 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 GATAD1Q8WUU5 269 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 SMIM4Q8WVI0 70 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 HINT2Q9BX68 163 aa11.09□□□□□ -0.63
VAPA-209ENST00000585042 RBM38Q9H0Z9 239 aaKnown RBP11.09□□□□□ -0.63
VAPA-209ENST00000585042 RAB3DO95716 219 aa11.08□□□□□ -0.64
VAPA-209ENST00000585042 PGAM2P15259 253 aa11.08□□□□□ -0.64
VAPA-209ENST00000585042 G6PCP35575 357 aa11.08□□□□□ -0.64
VAPA-209ENST00000585042 MFAP4P55083 255 aa11.08□□□□□ -0.64
VAPA-209ENST00000585042 STEAP1BQ6NZ63 245 aa11.08□□□□□ -0.64
VAPA-209ENST00000585042 FXYD6Q9H0Q3 95 aa11.08□□□□□ -0.64
VAPA-209ENST00000585042 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
VAPA-209ENST00000585042 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
VAPA-209ENST00000585042 ALMS1Q8TCU4 4167 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 IGHV7-4-1A0A0J9YVY3 117 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 C15orf61A6NNL5 157 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 DISC1C4P0D8 188 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 CHEK1O14757 476 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 GSTZ1O43708 216 aaPredicted RBP11.07□□□□□ -0.64
VAPA-209ENST00000585042 CD74P04233 296 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 UBAC2Q8NBM4 344 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 ZNF114Q8NC26 417 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 TMEM116Q8NCL8 245 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 ZFAND1Q8TCF1 268 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 ZNF486Q96H40 463 aaPredicted RBP11.07□□□□□ -0.64
VAPA-209ENST00000585042 RNF2Q99496 336 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 RHPN1-AS1Q9BWJ2 59 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 NSG2Q9Y328 171 aa11.07□□□□□ -0.64
VAPA-209ENST00000585042 TRAV14DV4A0A0A6YYC5 116 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 IGHV3-21A0A0B4J1V1 117 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 MPTX1A8MV57 137 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 I3L2K1 104 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 AKAIN1P0CW23 69 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 RPL35AP18077 110 aaKnown RBP11.06□□□□□ -0.64
VAPA-209ENST00000585042 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 SCGB2B2Q4G0G5 96 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 PHLDA2Q53GA4 152 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 FAM90A2PQ658T7 463 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 LGALS9CQ6DKI2 356 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 TERB2Q8NHR7 220 aa11.06□□□□□ -0.64
VAPA-209ENST00000585042 PHLDA1Q8WV24 401 aaPredicted RBP11.06□□□□□ -0.64
VAPA-209ENST00000585042 ZNF207O43670 478 aaKnown RBP11.05□□□□□ -0.64
VAPA-209ENST00000585042 PYDC2Q56P42 97 aa11.05□□□□□ -0.64
VAPA-209ENST00000585042 SPANXN2Q5MJ10 180 aa11.05□□□□□ -0.64
VAPA-209ENST00000585042 CCDC71LQ8N9Z2 235 aa11.05□□□□□ -0.64
VAPA-209ENST00000585042 OR4A16Q8NH70 328 aa11.05□□□□□ -0.64
VAPA-209ENST00000585042 ZNF414Q96IQ9 312 aa11.05□□□□□ -0.64
VAPA-209ENST00000585042 SEC22AQ96IW7 307 aa11.05□□□□□ -0.64
VAPA-209ENST00000585042 RARRES2Q99969 163 aa11.05□□□□□ -0.64
VAPA-209ENST00000585042 MFFQ9GZY8 342 aa11.05□□□□□ -0.64
VAPA-209ENST00000585042 IGHV3OR16-8A0A075B7F1 116 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 YIF1AO95070 293 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 FAUP35544 74 aaKnown RBP11.04□□□□□ -0.64
VAPA-209ENST00000585042 AP3S2P59780 193 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 HSPE1P61604 102 aaKnown RBP11.04□□□□□ -0.64
VAPA-209ENST00000585042 ERHP84090 104 aaKnown RBP11.04□□□□□ -0.64
VAPA-209ENST00000585042 PRCDQ00LT1 54 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 H2BFWTQ7Z2G1 175 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 TBC1D26Q86UD7 250 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 LHFPL1Q86WI0 220 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 APRG1Q8IVJ8 170 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 PRRT1Q99946 306 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 SOSTQ9BQB4 213 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 GINS3Q9BRX5 216 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 C11orf68Q9H3H3 251 aaKnown RBP11.04□□□□□ -0.64
VAPA-209ENST00000585042 COPZ2Q9P299 210 aa11.04□□□□□ -0.64
VAPA-209ENST00000585042 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 DBX1A6NMT0 343 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms