RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 Q8N2B8 174 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ARRDC1Q8N5I2 433 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 POM121L12Q8N7R1 296 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 HSD17B11Q8NBQ5 300 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 OR10G9Q8NGN4 311 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 AQP3Q92482 292 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 LITAFQ99732 161 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 SPIN2AQ99865 258 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 SPIN2BQ9BPZ2 258 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 PARP12Q9H0J9 701 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 NDUFB11Q9NX14 153 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 SNRNP200O75643 2136 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 NKX2-6A6NCS4 301 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 OR4C45A6NMZ5 311 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ANKRD65E5RJM6 399 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ATP6V1G2-DDX39BF2Z307 99 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 J3QLW9 94 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 GSTZ1O43708 216 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 GGCTO75223 188 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 NDUFS6O75380 124 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 MED6O75586 246 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 SERF1AO75920 110 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 HRASP01112 189 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 OPN1SWP03999 348 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 MELTFP08582 738 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ADRA2AP08913 450 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 CD3GP09693 182 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 CT45A6P0DMU7 189 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 CT45A5P0DMU8 189 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 CT45A7P0DMV0 189 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF19P17023 458 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 CAV2P51636 162 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 CACNG7P62955 275 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 CXCL6P80162 114 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 RUNX1Q01196 453 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 RTL8BQ17RB0 113 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 C17orf58Q2M2W7 97 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 BSXQ3C1V8 233 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 KLHL12Q53G59 568 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 PDZD11Q5EBL8 140 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 CT45A1Q5HYN5 189 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 RPS27LQ71UM5 84 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 OR2T10Q8NGZ9 312 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 CT45A3Q8NHU0 189 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 LGALS14Q8TCE9 139 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 S100A16Q96FQ6 103 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 USMG5Q96IX5 58 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 PPP1R36Q96LQ0 422 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF714Q96N38 554 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 NMNAT3Q96T66 252 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF251Q9BRH9 671 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ABCG5Q9H222 651 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 RERGLQ9H628 205 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 IDI2-AS1Q9NZ38 188 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 LAMA1P25391 3075 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 SVILO95425 2214 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 TRAV30A0A087WSZ9 112 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 TRAV27A0A087WT01 109 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 TRAV39A0A0B4J263 110 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 IGHV1-69DA0A0B4J2H0 117 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 LOC107986453A0A1B0GWG9 222 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF705EA8MWA4 302 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 AIPO00170 330 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 IGHV1-69P01742 117 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 PSMB6P28072 239 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 HTR1DP28221 377 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF93P35789 620 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 RPL5P46777 297 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC35A2P78381 396 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 PSG7Q13046 419 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 VMA21Q3ZAQ7 101 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 KLF17Q5JT82 389 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 UBE2NLQ5JXB2 153 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 GLYATL3Q5SZD4 288 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF774Q6NX45 483 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF880Q6PDB4 577 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 LRRC18Q8N456 261 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 OR4D11Q8NGI4 311 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 C11orf52Q96A22 123 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 FLYWCH2Q96CP2 140 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 GPER1Q99527 375 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 SLIRPQ9GZT3 109 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 C12orf4Q9NQ89 552 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 MED29Q9NX70 200 aa1.45□□□□□ -2.18
SMCHD1-211ENST00000584897 SACSQ9NZJ4 4579 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 IGHV1OR15-1A0A075B7D0 117 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM240AA0A1B0GVK7 77 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ANKRD20A5PA0PJZ0 165 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 DISC1C4P0D8 188 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 NDUFC2-KCTD14E9PQ53 114 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 C19orf84I3L1E1 186 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 GATCO43716 136 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF253O75346 499 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 SCO1O75880 301 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 TTRP02766 147 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF728P0DKX0 622 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 S100A5P33763 92 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 UNC119Q13432 240 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 HERPUD1Q15011 391 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 PRR30Q53SZ7 412 aaPredicted RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms