RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SLC25A31Q9H0C2 315 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 TNFSF18Q9UNG2 199 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 IGSF23A1L1A6 192 aa12.78□□□□□ -0.36
CDK5RAP3-228ENST00000583363 IGLV1-40P01703 118 aa12.78□□□□□ -0.36
CDK5RAP3-228ENST00000583363 PRH1P02810 166 aa12.78□□□□□ -0.36
CDK5RAP3-228ENST00000583363 RPL12P30050 165 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-228ENST00000583363 ETV3LQ6ZN32 361 aa12.78□□□□□ -0.36
CDK5RAP3-228ENST00000583363 LINC01006Q8NI28 216 aa12.78□□□□□ -0.36
CDK5RAP3-228ENST00000583363 HYLS1Q96M11 299 aa12.78□□□□□ -0.36
CDK5RAP3-228ENST00000583363 PAIP2BQ9ULR5 123 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-228ENST00000583363 IGLV11-55A0A075B6I3 123 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 H3BUA1 57 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 IFNA4P05014 189 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OR8U8P0C7N1 319 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 METTL15P1P0C7V9 234 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 NUP62P37198 522 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ZFP69Q49AA0 526 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ACOT7LQ6ZUV0 252 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 CENPVQ7Z7K6 275 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ZNF329Q86UD4 541 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 INO80EQ8NBZ0 244 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OR4F5Q8NH21 305 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 RNASEH2CQ8TDP1 164 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 AQP10Q96PS8 301 aa12.77□□□□□ -0.37
CDK5RAP3-228ENST00000583363 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 PSMB11A5LHX3 300 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 CST7O76096 145 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 IGHG4P01861 327 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 HIST1H1BP16401 226 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 SULT1A1P50225 295 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 SLC35B1P78383 322 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 EWSR1Q01844 656 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 NHLH2Q02577 135 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ARL16Q0P5N6 197 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 HAPLN4Q86UW8 402 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 BSCL2Q96G97 398 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ZNF355PQ9NSJ1 428 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 MEGF8Q7Z7M0 2845 aa12.76□□□□□ -0.37
CDK5RAP3-228ENST00000583363 CLPSL1A2RUU4 121 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 RNF222A6NCQ9 220 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 PRSS46E5RG02 174 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 CORTO00230 105 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ARPC5O15511 151 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 CYB5BO43169 146 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 GPX4P36969 197 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 BAXQ07812 192 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 MLANAQ16655 118 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 TEX38Q6PEX7 206 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 C10orf99Q6UWK7 81 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 STX12Q86Y82 276 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OR10P1Q8NGE3 313 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 WIPF2Q8TF74 440 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 MISP3Q96FF7 219 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 MS4A10Q96PG2 267 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 MFFQ9GZY8 342 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 HSPB11Q9Y547 144 aa12.75□□□□□ -0.37
CDK5RAP3-228ENST00000583363 I3L2K1 104 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OR2J3O76001 311 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 NDUFB8O95169 186 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ELANEP08246 267 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 CXCL2P19875 107 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 PSMB8P28062 276 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 RAB9AP51151 201 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 EXOSC2Q13868 293 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OR8G2PQ6IF36 304 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 PPP1R14BQ96C90 147 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 KLK15Q9H2R5 256 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 FNDC4Q9H6D8 234 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ZC4H2Q9NQZ6 224 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 THYN1Q9P016 225 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 FBXL7Q9UJT9 491 aa12.74□□□□□ -0.37
CDK5RAP3-228ENST00000583363 MGAM2Q2M2H8 2515 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 K7EIM0 57 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 SCAF4O95104 1147 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 MT-CO2P00403 227 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 TRGV3P03979 118 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 PF4V1P10720 104 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 MDKP21741 143 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 S100A11P31949 105 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 EIF2B2P49770 351 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 RHOGP84095 191 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 CD69Q07108 199 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 FOXE3Q13461 319 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OR2F1Q13607 317 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 LGALSLQ3ZCW2 172 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 COMMD1Q8N668 190 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 KLHDC1Q8N7A1 406 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 TMEM217Q8N7C4 229 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 RNF152Q8N8N0 203 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 NECAP1Q8NC96 275 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OR5AU1Q8NGC0 362 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 CACNG8Q8WXS5 425 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 PINX1Q96BK5 328 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 GGACTQ9BVM4 153 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 SLA2Q9H6Q3 261 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 RNF114Q9Y508 228 aa12.73□□□□□ -0.37
CDK5RAP3-228ENST00000583363 A0A1B0GUS0 222 aa12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 AP2S1P53680 142 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 PROK1P58294 105 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms