RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 LYRM1O43325 122 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 UPK1BO75841 260 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 DHFRP00374 187 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 HPRT1P00492 218 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 HRASP01112 189 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 CLEC3BP05452 202 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 MED14OSP0DP75 135 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 FCGR2BP31994 310 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-215ENST00000583328 RPL27AP46776 148 aaKnown RBP9.08□□□□□ -0.96
TOP3A-215ENST00000583328 TAS2R31P59538 309 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 UNQ9165/PRO28630Q6UXU0 137 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 C2CD4CQ8TF44 421 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 AIFM2Q9BRQ8 373 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 RTBDNQ9BSG5 229 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-215ENST00000583328 PLEKHA2Q9HB19 425 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 COMMD9Q9P000 198 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 UFC1Q9Y3C8 167 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 TRBV7-1A0A0A6YYK4 115 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 IGHV3-35A0A0C4DH35 117 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 PLA2G10O15496 165 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 B3GALNT1O75752 331 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 IL6RP08887 468 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-215ENST00000583328 DEFA4P12838 97 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 MYOD1P15172 320 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 BTCP35070 178 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 ELLP55199 621 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-215ENST00000583328 TCTAP57738 103 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 POU2AF1Q16633 256 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 LAMTOR1Q6IAA8 161 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 VSTM2AQ8TAG5 236 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 GALNT14Q96FL9 552 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 RARRES2Q99969 163 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 MAP6D1Q9H9H5 199 aa9.07□□□□□ -0.96
TOP3A-215ENST00000583328 DNAH6Q9C0G6 4158 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 TEX13DA0A0J9YY54 714 aaPredicted RBP9.06□□□□□ -0.96
TOP3A-215ENST00000583328 C3orf85A0A1B0GTC6 90 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 CRYM-AS1A6NIL9 109 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 E7EUB6 86 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 TSPAN4O14817 238 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 S1PR2O95136 353 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 NDUFB6O95139 128 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 CRYGCP07315 174 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 RPA2P15927 270 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 NQO2P16083 231 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 HIST1H1BP16401 226 aaKnown RBP9.06□□□□□ -0.96
TOP3A-215ENST00000583328 PSMB6P28072 239 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 LPAR6P43657 344 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 CCR6P51684 374 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 ASAH1Q13510 395 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 ODF3L2Q3SX64 289 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 PLET1Q6UQ28 207 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 VKORC1L1Q8N0U8 176 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 OR5B3Q8NH48 314 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 CXorf58Q96LI9 332 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 NAA60Q9H7X0 242 aa9.06□□□□□ -0.96
TOP3A-215ENST00000583328 MFSD2BA6NFX1 497 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 IGLL5B9A064 214 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 KBTBD11O94819 623 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 SERPINE2P07093 398 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 AREGP15514 252 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 UCP1P25874 307 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 GPR183P32249 361 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 ERVK-16P61578 105 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 MZT2BQ6NZ67 158 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 TMED4Q7Z7H5 227 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 PUSL1Q8N0Z8 303 aaKnown RBP9.05□□□□□ -0.96
TOP3A-215ENST00000583328 TMEM230Q96A57 120 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 OR2A7Q96R45 310 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 TP53RKQ96S44 253 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 CSTL1Q9H114 145 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 BET1LQ9NYM9 111 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 TBC1D24Q9ULP9 559 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
TOP3A-215ENST00000583328 OR4C46A6NHA9 309 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 MARCH11A6NNE9 402 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 MPTX1A8MV57 137 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 REG1AP05451 166 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 OR5AC1P0C628 307 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 AKR1C4P17516 323 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 MAS1LP35410 378 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 IFITM3Q01628 133 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 DHODHQ02127 395 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 TMEM128Q5BJH2 165 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 SSX9Q7RTT3 188 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 CADM3Q8N126 398 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 CENPSQ8N2Z9 138 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 DMBX1Q8NFW5 382 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 OR4A5Q8NH83 315 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 TMEM167AQ8TBQ9 72 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 TSC22D3Q99576 134 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 TMEM222Q9H0R3 208 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 TMEM140Q9NV12 185 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 KCNIP3Q9Y2W7 256 aa9.04□□□□□ -0.96
TOP3A-215ENST00000583328 IGLV11-55A0A075B6I3 123 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 A0A1B0GW64 132 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 ATG12O94817 140 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 KRASP01116 189 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms