RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 WRNQ14191 1432 aaPredicted RBP eCLIP1.5□□□□□ -2.17
SMARCE1-219ENST00000583294 ADCY9O60503 1353 aa1.5□□□□□ -2.17
SMARCE1-219ENST00000583294 TECTAO75443 2155 aa1.5□□□□□ -2.17
SMARCE1-219ENST00000583294 IGKV1D-42A0A075B6H8 117 aa1.5□□□□□ -2.17
SMARCE1-219ENST00000583294 TRAV14DV4A0A0A6YYC5 116 aa1.5□□□□□ -2.17
SMARCE1-219ENST00000583294 CRYGAP11844 174 aa1.5□□□□□ -2.17
SMARCE1-219ENST00000583294 RPL5P46777 297 aaKnown RBP1.5□□□□□ -2.17
SMARCE1-219ENST00000583294 RPS20P60866 119 aaKnown RBP1.5□□□□□ -2.17
SMARCE1-219ENST00000583294 CKLFQ9UBR5 152 aa1.5□□□□□ -2.17
SMARCE1-219ENST00000583294 DPRXA6NFQ7 191 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 SMIM23A6NLE4 172 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 HCRTO43612 131 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 CHP2O43745 196 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 LYPLA2O95372 231 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 FKBP2P26885 142 aaKnown RBP1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 IMPG1Q17R60 797 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 SPOPLQ6IQ16 392 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 LINC00471Q8N535 108 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 ZNF565Q8N9K5 539 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 OR13C4Q8NGS5 318 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 PFN4Q8NHR9 129 aa1.49□□□□□ -2.17
SMARCE1-219ENST00000583294 MTUS2Q5JR59 1369 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 ANAPC1Q9H1A4 1944 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 OR5F1O95221 314 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 HTR1AP08908 422 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 PLCXD2Q0VAA5 305 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 ITGB3BPQ13352 177 aaPredicted RBP1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 ACOT6Q3I5F7 207 aaPredicted RBP1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 LPCAT3Q6P1A2 487 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 H1FXQ92522 213 aaKnown RBP1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 CCDC42Q96M95 316 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 NIPSNAP1Q9BPW8 284 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 ULBP3Q9BZM4 244 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 OR5AC2Q9NZP5 309 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 VPS29Q9UBQ0 182 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 ROS1P08922 2347 aa1.48□□□□□ -2.17
SMARCE1-219ENST00000583294 TRAV9-1A0A075B6T8 112 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 EXOC1LA0A1B0GW35 172 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 CRYZL1O95825 349 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 RNASE3P12724 160 aaKnown RBP1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 SPI1P17947 270 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 CDK10Q15131 360 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 AQP3Q92482 292 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 TOMM6Q96B49 74 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 DCUN1D1Q96GG9 259 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 SLC50A1Q9BRV3 221 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 PARVGQ9HBI0 331 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 HECW1Q76N89 1606 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 HECW2Q9P2P5 1572 aa1.47□□□□□ -2.17
SMARCE1-219ENST00000583294 IGKV2D-26A0A0A0MRZ7 120 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 FUOMA2VDF0 154 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 OR4C46A6NHA9 309 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 CLDN24A6NM45 220 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 RPS17P08708 135 aaKnown RBP1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 UBE2IP63279 158 aaKnown RBP1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 KHDC3LQ587J8 217 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 DPPA3Q6W0C5 159 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 Q6ZQT0 140 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 MIR17HGQ75NE6 70 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 CLDN22Q8N7P3 220 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 TERB2Q8NHR7 220 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 C8orf76Q96K31 380 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 TSPAN32Q96QS1 320 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 MRPL27Q9P0M9 148 aaKnown RBP1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 TMEM56-RWDD3S4R434 201 aa1.46□□□□□ -2.18
SMARCE1-219ENST00000583294 TOPBP1Q92547 1522 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 CACNA1BQ00975 2339 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 CTSDP07339 412 aaPredicted RBP1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 ZNF826PQ6ZT77 177 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 TRAPPC5Q8IUR0 188 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 C12orf29Q8N999 325 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 OR5A1Q8NGJ0 315 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 TMEM147Q9BVK8 224 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 TRABDQ9H4I3 376 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 SLC39A9Q9NUM3 307 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 SNURFQ9Y675 71 aa1.45□□□□□ -2.18
SMARCE1-219ENST00000583294 BUB1B-PAK6H3BSN5 160 aa1.44□□□□□ -2.18
SMARCE1-219ENST00000583294 FADS1O60427 444 aa1.44□□□□□ -2.18
SMARCE1-219ENST00000583294 IFNA10P01566 189 aa1.44□□□□□ -2.18
SMARCE1-219ENST00000583294 OR4E2Q8NGC2 313 aa1.44□□□□□ -2.18
SMARCE1-219ENST00000583294 ODF3Q96PU9 254 aa1.44□□□□□ -2.18
SMARCE1-219ENST00000583294 TRAV26-2A0A0B4J265 109 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 FAM236DA0A1B0GTK5 79 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 PQLC2LA1A4F0 135 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 SERPINA6P08185 405 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 ASAH2BP0C7U1 165 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 FAM236CP0DP71 79 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 OMPP47874 163 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 DEFB128Q7Z7B8 93 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 OR8J2Q8NGG1 315 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 OR4D11Q8NGI4 311 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 ERGIC3Q9Y282 383 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 NUP155O75694 1391 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 EXPH5Q8NEV8 1989 aa1.43□□□□□ -2.18
SMARCE1-219ENST00000583294 TRAV1-1A0A0B4J248 108 aa1.42□□□□□ -2.18
SMARCE1-219ENST00000583294 A0A0D9SG52 128 aa1.42□□□□□ -2.18
SMARCE1-219ENST00000583294 BRS3P32247 399 aa1.42□□□□□ -2.18
SMARCE1-219ENST00000583294 CEBPGP53567 150 aa1.42□□□□□ -2.18
SMARCE1-219ENST00000583294 CTAG1AP78358 180 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms