RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 HMX3A6NHT5 357 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 NPIPB5A8MRT5 1133 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 SCAF4O95104 1147 aaKnown RBP10.11□□□□□ -0.79
SS18-222ENST00000582792 IGHV3-23P01764 117 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 OR5AC1P0C628 307 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 RPL8P62917 257 aaKnown RBP10.11□□□□□ -0.79
SS18-222ENST00000582792 SRPXP78539 464 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 TMEM187Q14656 261 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 FAM106AQ4KMX7 169 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 THOC7Q6I9Y2 204 aaKnown RBP10.11□□□□□ -0.79
SS18-222ENST00000582792 CLEC19AQ6UXS0 136 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 C19orf35Q6ZS72 473 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 SSX9Q7RTT3 188 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 FAM219AQ8IW50 185 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 VKORC1L1Q8N0U8 176 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 CENPSQ8N2Z9 138 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 UXS1Q8NBZ7 420 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 GLYATL2Q8WU03 294 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 SRSF8Q9BRL6 282 aaKnown RBP10.11□□□□□ -0.79
SS18-222ENST00000582792 FKBP11Q9NYL4 201 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 TP53TG1Q9Y2A0 90 aa10.11□□□□□ -0.79
SS18-222ENST00000582792 ZNF320A2RRD8 509 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 KRASP01116 189 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 P0C879 139 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 AKR1C4P17516 323 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 HLA-GP17693 338 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 G6PCP35575 357 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 SUPT4H1P63272 117 aaKnown RBP10.1□□□□□ -0.79
SS18-222ENST00000582792 TRIM16LQ309B1 348 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 TM4SF20Q53R12 229 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 BTNL8Q6UX41 500 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 Q6ZWC4 215 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 LYG2Q86SG7 212 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 RPP25LQ8N5L8 163 aaKnown RBP10.1□□□□□ -0.79
SS18-222ENST00000582792 RBPMSQ93062 196 aaKnown RBP10.1□□□□□ -0.79
SS18-222ENST00000582792 FANCD2OSQ96PS1 177 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 PRNDQ9UKY0 176 aa10.1□□□□□ -0.79
SS18-222ENST00000582792 KLK5Q9Y337 293 aaPredicted RBP10.1□□□□□ -0.79
SS18-222ENST00000582792 HECTD4Q9Y4D8 3996 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 TRAV25A0A0B4J276 109 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 FAM240BA0A1B0GVZ2 78 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 DUXBA0A1W2PPF3 345 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 SPRY2O43597 315 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 SNAPC5O75971 98 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 SFT2D2O95562 160 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 TCRBP04435 133 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 CRYGCP07315 174 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 ATF4P18848 351 aaPredicted RBP10.09□□□□□ -0.79
SS18-222ENST00000582792 BMI1P35226 326 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 RPL27AP46776 148 aaKnown RBP10.09□□□□□ -0.79
SS18-222ENST00000582792 DEFA1P59665 94 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 DEFA3P59666 94 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 IFITM3Q01628 133 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 KLK9Q2XQG4 91 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 SP6Q3SY56 376 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 H2BFWTQ7Z2G1 175 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 TMED4Q7Z7H5 227 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 SELENOHQ8IZQ5 122 aaKnown RBP10.09□□□□□ -0.79
SS18-222ENST00000582792 LGI3Q8N145 548 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 LRTM2Q8N967 370 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 LSM10Q969L4 123 aaKnown RBP10.09□□□□□ -0.79
SS18-222ENST00000582792 EEF1AKMT3Q96AZ1 226 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 KLK9Q9UKQ9 250 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 S4R3C0 116 aa10.09□□□□□ -0.79
SS18-222ENST00000582792 A0A0B4J2A0 478 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 A0A1B0GW64 132 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 E7EUB6 86 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 DHFRP00374 187 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 IGKV1-5P01602 117 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 C8orf88P0DMB2 117 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 APOC4P55056 127 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 HSD17B13Q7Z5P4 300 aaPredicted RBP10.08□□□□□ -0.8
SS18-222ENST00000582792 DUSP18Q8NEJ0 188 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 OR1L6Q8NGR2 347 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 OR1L8Q8NGR8 309 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 OR5B3Q8NH48 314 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 MARC2Q969Z3 335 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 RRNAD1Q96FB5 475 aaKnown RBP10.08□□□□□ -0.8
SS18-222ENST00000582792 FYTTD1Q96QD9 318 aaKnown RBP10.08□□□□□ -0.8
SS18-222ENST00000582792 COMMD5Q9GZQ3 224 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 TMEM14BQ9NUH8 114 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 CACFD1Q9UGQ2 172 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 SHPKQ9UHJ6 478 aa10.08□□□□□ -0.8
SS18-222ENST00000582792 TRAV3A0A0B4J244 114 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 C15orf61A6NNL5 157 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 UBE2CO00762 179 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 AREGP15514 252 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 HIST1H1BP16401 226 aaKnown RBP10.07□□□□□ -0.8
SS18-222ENST00000582792 CTRB1P17538 263 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 PSMB6P28072 239 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 AKR1C2P52895 323 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 OR2B8PP59922 312 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 PPP1R1AQ13522 171 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 DEFB135Q30KP9 77 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 TMEM268Q5VZI3 342 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 CTRB2Q6GPI1 263 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 UNQ9165/PRO28630Q6UXU0 137 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 RBPMS2Q6ZRY4 209 aaKnown RBP10.07□□□□□ -0.8
SS18-222ENST00000582792 OR2C3Q8N628 320 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms