RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 OR2G3Q8NGZ4 309 aa9.98□□□□□ -0.81
SRSF1-204ENST00000581979 SRSF12Q8WXF0 261 aaKnown RBP9.98□□□□□ -0.81
SRSF1-204ENST00000581979 PARD6GQ9BYG4 376 aaPredicted RBP9.98□□□□□ -0.81
SRSF1-204ENST00000581979 WDR61Q9GZS3 305 aaKnown RBP9.98□□□□□ -0.81
SRSF1-204ENST00000581979 SMCO3A2RU48 225 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 ATP6V1G1O75348 118 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 REG1AP05451 166 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 RNASE1P07998 156 aaKnown RBP9.97□□□□□ -0.81
SRSF1-204ENST00000581979 SULT1A2P50226 295 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 BPIFB3P59826 476 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 DLK1P80370 383 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 VWC2Q2TAL6 325 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 BSXQ3C1V8 233 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 ABHD5Q8WTS1 349 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 CXorf58Q96LI9 332 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 GGACTQ9BVM4 153 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 MEGF9Q9H1U4 602 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 PRDM13Q9H4Q3 707 aa9.97□□□□□ -0.81
SRSF1-204ENST00000581979 LINC00862A6NCI5 91 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 ZNF705EA8MWA4 302 aaPredicted RBP9.96□□□□□ -0.81
SRSF1-204ENST00000581979 PRSS46E5RG02 174 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 FGF16O43320 207 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 FBP1P09467 338 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 FGF7P21781 194 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 FOXL1Q12952 345 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 FXYD3Q14802 87 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 TAF15Q92804 592 aaKnown RBP eCLIP9.96□□□□□ -0.81
SRSF1-204ENST00000581979 DUX5Q96PT3 197 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 RASL11BQ9BPW5 248 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 RSG1Q9BU20 258 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 RFNGQ9Y644 331 aa9.96□□□□□ -0.81
SRSF1-204ENST00000581979 SOX21Q9Y651 276 aaPredicted RBP9.96□□□□□ -0.81
SRSF1-204ENST00000581979 IGLC7A0M8Q6 106 aa9.96□□□□□ -0.82
SRSF1-204ENST00000581979 TEX22C9J3V5 150 aa9.96□□□□□ -0.82
SRSF1-204ENST00000581979 PRH1P02810 166 aa9.96□□□□□ -0.82
SRSF1-204ENST00000581979 APELAP0DMC3 54 aa9.96□□□□□ -0.82
SRSF1-204ENST00000581979 SSBP2P81877 361 aaPredicted RBP9.96□□□□□ -0.82
SRSF1-204ENST00000581979 HSD17B13Q7Z5P4 300 aaPredicted RBP9.96□□□□□ -0.82
SRSF1-204ENST00000581979 Q8N9W7 124 aa9.96□□□□□ -0.82
SRSF1-204ENST00000581979 SSMEM1Q8WWF3 244 aa9.96□□□□□ -0.82
SRSF1-204ENST00000581979 SSX3Q99909 188 aa9.96□□□□□ -0.82
SRSF1-204ENST00000581979 PFDN2Q9UHV9 154 aa9.96□□□□□ -0.82
SRSF1-204ENST00000581979 AREGP15514 252 aa9.95□□□□□ -0.82
SRSF1-204ENST00000581979 RAB5CP51148 216 aa9.95□□□□□ -0.82
SRSF1-204ENST00000581979 AKR1C8PQ5T2L2 129 aa9.95□□□□□ -0.82
SRSF1-204ENST00000581979 ZNF562Q6V9R5 426 aa9.95□□□□□ -0.82
SRSF1-204ENST00000581979 COMMD7Q86VX2 200 aa9.95□□□□□ -0.82
SRSF1-204ENST00000581979 SGMS2Q8NHU3 365 aa9.95□□□□□ -0.82
SRSF1-204ENST00000581979 SAT2Q96F10 170 aaPredicted RBP9.95□□□□□ -0.82
SRSF1-204ENST00000581979 P2RX4Q99571 388 aa9.95□□□□□ -0.82
SRSF1-204ENST00000581979 SRSF8Q9BRL6 282 aaKnown RBP9.95□□□□□ -0.82
SRSF1-204ENST00000581979 PSMG3Q9BT73 122 aaPredicted RBP9.95□□□□□ -0.82
SRSF1-204ENST00000581979 ZNF747Q9BV97 191 aa9.95□□□□□ -0.82
SRSF1-204ENST00000581979 FBXO7Q9Y3I1 522 aa9.95□□□□□ -0.82
SRSF1-204ENST00000581979 TNCP24821 2201 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 C17orf112F2Z3M2 114 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 CAMLGP49069 296 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 BLOC1S1P78537 153 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 AKR1C1Q04828 323 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 BTNL8Q6UX41 500 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 Q6ZRG5 221 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 ZNF709Q8N972 641 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 ARPC1AQ92747 370 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 SLC25A33Q9BSK2 321 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 FAM103A1Q9BTL3 118 aaKnown RBP9.94□□□□□ -0.82
SRSF1-204ENST00000581979 NPVFQ9HCQ7 196 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 WDR83OSQ9Y284 106 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 TIMM9Q9Y5J7 89 aa9.94□□□□□ -0.82
SRSF1-204ENST00000581979 UMAD1C9J7I0 102 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 H3BUX3 64 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 CX3CL1P78423 397 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 DEFB112Q30KQ8 113 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 ARSJQ5FYB0 599 aaPredicted RBP9.93□□□□□ -0.82
SRSF1-204ENST00000581979 ZNF114Q8NC26 417 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 RNASEH2CQ8TDP1 164 aaKnown RBP9.93□□□□□ -0.82
SRSF1-204ENST00000581979 RBM14Q96PK6 669 aaKnown RBP9.93□□□□□ -0.82
SRSF1-204ENST00000581979 NPCDR1Q9BY65 106 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 MOB4Q9Y3A3 225 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 MDFIC2A0A1B0GVS7 189 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 FNDC10F2Z333 226 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 MPDU1O75352 247 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 MDKP21741 143 aaPredicted RBP9.93□□□□□ -0.82
SRSF1-204ENST00000581979 GPX4P36969 197 aaPredicted RBP9.93□□□□□ -0.82
SRSF1-204ENST00000581979 OPRK1P41145 380 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 ELLP55199 621 aaPredicted RBP9.93□□□□□ -0.82
SRSF1-204ENST00000581979 CD69Q07108 199 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 PXDC1Q5TGL8 231 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 TREML4Q6UXN2 200 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 TMEM219Q86XT9 240 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 FAM213BQ8TBF2 198 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 PIFOQ8TCI5 191 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 MISP3Q96FF7 219 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 SLC35E1Q96K37 410 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 CITED4Q96RK1 184 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 PARP11Q9NR21 331 aa9.93□□□□□ -0.82
SRSF1-204ENST00000581979 MGAM2Q2M2H8 2515 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 IGHV7-81A0A0B4J1V7 117 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 TEX46H3BTG2 121 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 HLA-DRB1P01911 266 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms