RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 RABAC1Q9UI14 185 aa5.33□□□□□ -1.56
SMARCE1-217ENST00000580654 RBM7Q9Y580 266 aaKnown RBP5.33□□□□□ -1.56
SMARCE1-217ENST00000580654 DNAH8Q96JB1 4490 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 IGKV1D-8A0A087WSZ0 117 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 TMEM189A5PLL7 270 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 SNTNA6NMZ2 147 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 J3QRK9 145 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 YIF1AO95070 293 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 DIRAS3O95661 229 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 CD5P06127 495 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 CDK1P06493 297 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 SERPINE2P07093 398 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 FCGR3AP08637 254 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 LINC00310P59036 64 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 TIMM50Q3ZCQ8 353 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 Q56UQ5 140 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 LRRTM1Q86UE6 522 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 CBR4Q8N4T8 237 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 ZNF485Q8NCK3 441 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 OR4S2Q8NH73 311 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 DCANP1Q8TF63 244 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 RAB40CQ96S21 281 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 GPHA2Q96T91 129 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 SRSF8Q9BRL6 282 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 Q9H3A6 140 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 BET1LQ9NYM9 111 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 OAZ3Q9UMX2 235 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 POMPQ9Y244 141 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 MRPS7Q9Y2R9 242 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 KCNK7Q9Y2U2 307 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 RBMX2Q9Y388 322 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 PRELID3BQ9Y3B1 194 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 LRP2P98164 4655 aa5.32□□□□□ -1.56
SMARCE1-217ENST00000580654 IGKV1D-13A0A0B4J2D9 117 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 SMIM9A6NGZ8 99 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 OR13C7P0DN81 318 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 IGKV1-13P0DP09 117 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 CD37P11049 281 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 CALB2P22676 271 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 CCL18P55774 89 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 TAS2R43P59537 309 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 RPL11P62913 178 aaKnown RBP5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 GNGT1P63211 74 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 GAMTQ14353 236 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 INSL4Q14641 139 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 ZIK1Q3SY52 487 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 ZNF773Q6PK81 442 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 TOMM20LQ6UXN7 152 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 RHOXF1Q8NHV9 184 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 APH1BQ8WW43 257 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 C1QTNF4Q9BXJ3 329 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 NXF2Q9GZY0 626 aaKnown RBP5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 PTTG2Q9NZH5 202 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 CLEC2DQ9UHP7 191 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 F11RQ9Y624 299 aaKnown RBP5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 RFNGQ9Y644 331 aa5.31□□□□□ -1.56
SMARCE1-217ENST00000580654 PNMA8CA0A1B0GUJ8 204 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 TEX48A0A1B0GUV7 120 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 RPS10-NUDT3A0A1W2PQS6 291 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 GAGE10A6NGK3 116 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 UPK2O00526 184 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 CTDSP2O14595 271 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 NUDT3O95989 172 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 HRASP01112 189 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 FGF9P31371 208 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 SMN1Q16637 294 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 KCTD21Q4G0X4 260 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 TMPRSS11AQ6ZMR5 421 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 SSX7Q7RTT5 188 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 LYSMD2Q8IV50 215 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 STXBP6Q8NFX7 210 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 RNF141Q8WVD5 230 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 TCTEX1D2Q8WW35 142 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 SAT2Q96F10 170 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 GINS4Q9BRT9 223 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 QTRT1Q9BXR0 403 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 HRASLSQ9HDD0 168 aa5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 YTHDF2Q9Y5A9 579 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-217ENST00000580654 IGHV3OR16-12A0A075B7B8 117 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 TEX50A0A1B0GTY4 177 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 H0Y8G0 127 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 H3BMM0 161 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 I3L2K1 104 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 CIDEAO60543 219 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 IGHV3-48P01763 117 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 HLA-DQB1P01920 261 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 ALPLP05186 524 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 EIF4EP06730 217 aaKnown RBP5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 MALP21145 153 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 DCKP27707 260 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 FXYD7P58549 80 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 LINC00315P59091 139 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 DAD1P61803 113 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 P2RY14Q15391 338 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 USF2Q15853 346 aaPredicted RBP5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 TTC32Q5I0X7 151 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 TTC23Q5W5X9 447 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 GSG1LQ6UXU4 331 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 CCDC28AQ8IWP9 274 aa5.29□□□□□ -1.56
SMARCE1-217ENST00000580654 GFI1Q99684 422 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms