RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 C2orf88Q9BSF0 95 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 C19orf24Q9BVV8 132 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 S4R3C0 116 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 TMEM189A5PLL7 270 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 CD40P25942 277 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 SCNM1Q9BWG6 230 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 ELOVL5Q9NYP7 299 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 CA7P43166 264 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 Q0VFX4 171 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 MRPL32Q9BYC8 188 aaKnown RBP11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 STAG3L2P0CL84 134 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 STAG3L3P0CL85 134 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 MYOD1P15172 320 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 SRSF7Q16629 238 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 GRAMD2BQ96HH9 432 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 AGMATQ9BSE5 352 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 MRPL37Q9BZE1 423 aaKnown RBP11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 RNF115Q9Y4L5 304 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 TRAV5A0A0B4J249 113 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 IGHV2OR16-5A0A0B4J2B6 119 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 GCSHP23434 173 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 LCN12Q6JVE5 192 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 SELENOKQ9Y6D0 94 aa11.31□□□□□ -0.6
TRAPPC8-207ENST00000580104 F5H697 171 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 TNFSF13O75888 250 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 FOXL1Q12952 345 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 WDR31Q8NA23 367 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 SEMA5BQ9P283 1151 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 NTF4P34130 210 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 B3GALT5-AS1P59052 145 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 Q1RN00 199 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 TMEM105Q8N8V8 129 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 KBTBD11-OT1A0A1B0GTJ5 212 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 AHRRA9YTQ3 701 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 MGST2Q99735 147 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 IZUMO1RA6ND01 250 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 C15orf61A6NNL5 157 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 MC5RP33032 325 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 CEACAM3P40198 252 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 FOXL2NBQ6ZUU3 175 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 ZCCHC24Q8N2G6 241 aaKnown RBP11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 BEND2Q8NDZ0 799 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 OR10W1Q8NGF6 305 aa11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 MRPL20Q9BYC9 149 aaKnown RBP11.3□□□□□ -0.6
TRAPPC8-207ENST00000580104 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 CD3EP07766 207 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 GFRA1P56159 465 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 SCGB1D4Q6XE38 83 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 SAA1P0DJI8 122 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 ARF6P62330 175 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 Q6P435 159 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 CREBBPQ92793 2442 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 IGKV3D-15A0A087WSY6 115 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 IL18BPO95998 194 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 CCL3L1P16619 93 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 DLEU1O43261 78 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 MRPS18CQ9Y3D5 142 aaKnown RBP11.29□□□□□ -0.6
TRAPPC8-207ENST00000580104 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 IGKV1-39P01597 117 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 IGKV1D-39P04432 117 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 FAM27E3Q08E93 113 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 TM4SF20Q53R12 229 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 WFDC3Q8IUB2 231 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 GUCD1Q96NT3 240 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 NCOA6Q14686 2063 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 ARHGAP21Q5T5U3 1957 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 C9orf172C9J069 976 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 LYPD6Q86Y78 171 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 C9orf106Q8NAJ2 232 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 SNHG12Q9BXW3 62 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 CDC42EP3Q9UKI2 254 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 KIR2DL2P43627 348 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 OR52E5Q8NH55 327 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 LYPD6BQ8NI32 183 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 C18orf15Q96N68 181 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 C15orf62A8K5M9 175 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 LIPFP07098 398 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 ABCA4P78363 2273 aa11.28□□□□□ -0.6
TRAPPC8-207ENST00000580104 YPEL1O60688 119 aa11.27□□□□□ -0.6
TRAPPC8-207ENST00000580104 YPEL2Q96QA6 119 aa11.27□□□□□ -0.6
TRAPPC8-207ENST00000580104 ALKBH7Q9BT30 221 aaPredicted RBP11.27□□□□□ -0.6
TRAPPC8-207ENST00000580104 GNB1LQ9BYB4 327 aa11.27□□□□□ -0.6
TRAPPC8-207ENST00000580104 ZNF207O43670 478 aaKnown RBP11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 APOHP02749 345 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 PLP1P60201 277 aa11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 C1orf185Q5T7R7 199 aa11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 UNQ5815/PRO19632Q6UWF5 114 aa11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 OSTCQ9NRP0 149 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms