RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 PLEKHA3Q9HB20 300 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 ZNF705GA8MUZ8 300 aaPredicted RBP8.55□□□□□ -1.04
TOP3A-209ENST00000580095 CXorf1O96002 111 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 TIMP3P35625 211 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 ADIPOQQ15848 244 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 IGFL3Q6UXB1 125 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 TMEM183AQ8IXX5 376 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 FAM222BQ8WU58 562 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 ACY3Q96HD9 319 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 SFRP2Q96HF1 295 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 KCNIP2Q9NS61 270 aa8.55□□□□□ -1.04
TOP3A-209ENST00000580095 SLC25A10Q9UBX3 287 aaPredicted RBP8.55□□□□□ -1.04
TOP3A-209ENST00000580095 RPUSD1Q9UJJ7 312 aaKnown RBP8.55□□□□□ -1.04
TOP3A-209ENST00000580095 FOXA2Q9Y261 457 aaPredicted RBP8.55□□□□□ -1.04
TOP3A-209ENST00000580095 DSCAML1Q8TD84 2053 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 IGHV3-72A0A0B4J1Y9 119 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 GRIFINA4D1Z8 144 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 NKX6-3A6NJ46 265 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 K7EN84 100 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 DVL1O14640 695 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 TNFSF4P23510 183 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 BRS3P32247 399 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 SSBP2P81877 361 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-209ENST00000580095 PSG5Q15238 335 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 TMEM256Q8N2U0 113 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 OR2T6Q8NHC8 308 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 NUDT11Q96G61 164 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 CSTL1Q9H114 145 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 PTPRQQ9UMZ3 2332 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 TEX50A0A1B0GTY4 177 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 CCL25O15444 150 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 NUPR1O60356 82 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 MPDU1O75352 247 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 OR10J1P30954 320 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 GATA4P43694 442 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 LGALS4P56470 323 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 SLC35B1P78383 322 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 MORN5Q5VZ52 161 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 TEX38Q6PEX7 206 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 C19orf35Q6ZS72 473 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 C1orf174Q8IYL3 243 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 FAM57AQ8TBR7 257 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 ANAPC16Q96DE5 110 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 SFXN3Q9BWM7 321 aa8.54□□□□□ -1.04
TOP3A-209ENST00000580095 TRAV5A0A0B4J249 113 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 FAM90A9PA6NNJ1 464 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 OR7C2O60412 319 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 GGCTO75223 188 aaKnown RBP8.53□□□□□ -1.04
TOP3A-209ENST00000580095 VENTXO95231 258 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 REG1AP05451 166 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 LINC00869P0C866 280 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 KIR2DS2P43631 304 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 TMPRSS3P57727 454 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 ERVFC1-1P60608 527 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 SELENOTP62341 195 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 TMEM108Q6UXF1 575 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 SLC25A48Q6ZT89 311 aaKnown RBP8.53□□□□□ -1.04
TOP3A-209ENST00000580095 S100A7AQ86SG5 101 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 HARBI1Q96MB7 349 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 MALRD1Q5VYJ5 2156 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 ANKHD1Q8IWZ3 2542 aaKnown RBP8.53□□□□□ -1.04
TOP3A-209ENST00000580095 TRGV8A0A0C4DH27 118 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 C16orf97H3BN30 126 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 THBDP07204 575 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 CBLN1P23435 193 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 CRYBB3P26998 211 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 ACTL10Q5JWF8 245 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 TMEM200BQ69YZ2 307 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 NHLRC2Q8NBF2 726 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 OR1L6Q8NGR2 347 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 RAB1CQ92928 201 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 RITA1Q96K30 269 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 NABP2Q9BQ15 211 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 TRAPPC1Q9Y5R8 145 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 AKAP6Q13023 2319 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 MDFIC2A0A1B0GVS7 189 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 UPK2O00526 184 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 RHOBP62745 196 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 RTL8BQ17RB0 113 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 KCNIP4Q6PIL6 250 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 SAP30LQ9HAJ7 183 aa8.53□□□□□ -1.04
TOP3A-209ENST00000580095 hADV38S2A0JD32 116 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 LYNX1G3V0Z9 82 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 PLAUP00749 431 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 LYNX1P0DP58 116 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 RPL29P47914 159 aaKnown RBP8.52□□□□□ -1.05
TOP3A-209ENST00000580095 FXYD3Q14802 87 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 C11orf42Q8N5U0 333 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 RNASEH2CQ8TDP1 164 aaKnown RBP8.52□□□□□ -1.05
TOP3A-209ENST00000580095 UHRF2Q96PU4 802 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 TPSG1Q9NRR2 321 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 ZFP30Q9Y2G7 519 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 COL6A6A6NMZ7 2263 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 CHD8Q9HCK8 2581 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 IGHV3-21A0A0B4J1V1 117 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 C17orf100A8MU93 164 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 C22orf46C9J442 243 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 TCL1AP56279 114 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 PRR20EP86478 221 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 PRR20CP86479 221 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms