RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 YTHDF1Q9BYJ9 559 aaKnown RBP3.74□□□□□ -1.81
PTPRM-208ENST00000578600 FGF23Q9GZV9 251 aaPredicted RBP3.74□□□□□ -1.81
PTPRM-208ENST00000578600 OR51V1Q9H2C8 321 aa3.74□□□□□ -1.81
PTPRM-208ENST00000578600 SPACA1Q9HBV2 294 aa3.74□□□□□ -1.81
PTPRM-208ENST00000578600 PARP11Q9NR21 331 aa3.74□□□□□ -1.81
PTPRM-208ENST00000578600 ZNF355PQ9NSJ1 428 aa3.74□□□□□ -1.81
PTPRM-208ENST00000578600 ING4Q9UNL4 249 aa3.74□□□□□ -1.81
PTPRM-208ENST00000578600 R4GMQ9 66 aa3.74□□□□□ -1.81
PTPRM-208ENST00000578600 V9GYQ6 96 aa3.74□□□□□ -1.81
PTPRM-208ENST00000578600 LYSTQ99698 3801 aa3.74□□□□□ -1.81
PTPRM-208ENST00000578600 A0A0B4J2A0 478 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 A0A0G2JND7 137 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 H3BN98 237 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 TEX46H3BTG2 121 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 FXYD1O00168 92 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 TNFRSF11BO00300 401 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 SDCBPO00560 298 aaPredicted RBP3.73□□□□□ -1.81
PTPRM-208ENST00000578600 SLC22A1O15245 554 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 CA11O75493 328 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 SULT1C4O75897 302 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 TTRP02766 147 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 TRGV3P03979 118 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 GYPBP06028 91 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 SCTP09683 121 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 UBCP0CG48 685 aaKnown RBP3.73□□□□□ -1.81
PTPRM-208ENST00000578600 CGB3P0DN86 165 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 CGB7P0DN87 165 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 DCKP27707 260 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 LGALS7P47929 136 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 TPPP2P59282 170 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 KRTAP10-6P60371 365 aaPredicted RBP3.73□□□□□ -1.81
PTPRM-208ENST00000578600 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 VSNL1P62760 191 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 CLINT1Q14677 625 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 PLGLAQ15195 96 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 C5orf64Q2M2E5 130 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 TMEM244Q5VVB8 128 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 GLYATQ6IB77 296 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 LYG2Q86SG7 212 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 TMEM104Q8NE00 496 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 CMTM5Q96DZ9 223 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 SULT4A1Q9BR01 284 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 REEP1Q9H902 201 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 PEF1Q9UBV8 284 aaKnown RBP3.73□□□□□ -1.81
PTPRM-208ENST00000578600 SHPKQ9UHJ6 478 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 OR52A1Q9UKL2 312 aa3.73□□□□□ -1.81
PTPRM-208ENST00000578600 TRBV9A0A0B4J1U6 114 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 TRAV25A0A0B4J276 109 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 TMEM30CPA0ZSE6 113 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 ZNF670-ZNF695F2Z2N8 137 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 F6UB75 175 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 G3V318 75 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 MRPS12O15235 138 aaKnown RBP3.72□□□□□ -1.81
PTPRM-208ENST00000578600 SLC31A2O15432 143 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 CCDC22O60826 627 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 FAM107AO95990 144 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 P0DMU3 169 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 FAM231AP0DMU4 169 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 FAM231CP0DMU5 169 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 FUT3P21217 361 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 GNG10P50151 68 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 ACTBP60709 375 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 C6orf183Q5T699 404 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 CTRB2Q6GPI1 263 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 ELP2Q6IA86 826 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 ZNF322Q6U7Q0 402 aaPredicted RBP3.72□□□□□ -1.81
PTPRM-208ENST00000578600 UNQ5815/PRO19632Q6UWF5 114 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 CMTM1Q8IZ96 169 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 C20orf203Q8NBC4 194 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 HSD17B11Q8NBQ5 300 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 OR5D14Q8NGL3 314 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 OR10G9Q8NGN4 311 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 OR2G3Q8NGZ4 309 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 DNAJC9Q8WXX5 260 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 GHSRQ92847 366 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 ARL11Q969Q4 196 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 MRPL48Q96GC5 212 aaKnown RBP3.72□□□□□ -1.81
PTPRM-208ENST00000578600 OPALINQ96PE5 141 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 SPACA5Q96QH8 159 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 TSNAXQ99598 290 aaKnown RBP3.72□□□□□ -1.81
PTPRM-208ENST00000578600 HSPB9Q9BQS6 159 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 CCL28Q9NRJ3 127 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 RBFOX1Q9NWB1 397 aaKnown RBP3.72□□□□□ -1.81
PTPRM-208ENST00000578600 NUBP2Q9Y5Y2 271 aa3.72□□□□□ -1.81
PTPRM-208ENST00000578600 HUWE1Q7Z6Z7 4374 aaKnown RBP3.71□□□□□ -1.82
PTPRM-208ENST00000578600 IGHV3-72A0A0B4J1Y9 119 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 FAM231BA6NCW3 169 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 OR5H14A6NHG9 310 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 H0YJX3 145 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 DEDDO75618 318 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 ATF1P18846 271 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 BLVRBP30043 206 aaPredicted RBP3.71□□□□□ -1.82
PTPRM-208ENST00000578600 REG1BP48304 166 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 SYNJ2BPP57105 145 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 GPR176Q14439 515 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 GUCA2BQ16661 112 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 COA6Q5JTJ3 125 aaKnown RBP3.71□□□□□ -1.82
PTPRM-208ENST00000578600 PLEKHG7Q6ZR37 379 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 PXT1Q8NFP0 134 aa3.71□□□□□ -1.82
PTPRM-208ENST00000578600 MARCH1Q8TCQ1 289 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms