RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 A0A1W2PPI3 338 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TCRBV4S1A1TA0A5B7 111 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ZNF320A2RRD8 509 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PSMB11A5LHX3 300 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 E7EUB6 86 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CCL21O00585 134 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SIAH2O43255 324 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 COX7A2P2O60397 106 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR7C2O60412 319 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CRYGBP07316 175 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 COL8A2P25067 703 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 RPL27AP46776 148 aaKnown RBP7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 RPL15P61313 204 aaKnown RBP7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PRSS8Q16651 343 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MRGPRG-AS1Q2M3A8 158 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ZNF672Q499Z4 452 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PDZD11Q5EBL8 140 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PYY3Q5JQD4 70 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PVRIGQ6DKI7 326 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ETFRF1Q6IPR1 90 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ZNF841Q6ZN19 808 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MMD2Q8IY49 270 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MUC15Q8N387 334 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 BEND2Q8NDZ0 799 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 C8orf46Q8TAG6 207 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PFDN5Q99471 154 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SLC25A33Q9BSK2 321 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CLEC7AQ9BXN2 247 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FNDC4Q9H6D8 234 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TPSG1Q9NRR2 321 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 IL36BQ9NZH7 164 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 AMMECR1Q9Y4X0 333 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FREM2Q5SZK8 3169 aa7.53□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SVILO95425 2214 aa7.52□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CADP27708 2225 aa7.52□□□□□ -1.2
CDK5RAP3-208ENST00000578525 YLPM1P49750 1951 aaKnown RBP7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 IGKV1D-37A0A075B6S9 117 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 IGHV3-72A0A0B4J1Y9 119 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 A0A1W2PRE2 83 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 IGLC7A0M8Q6 106 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 XKRY2A2RUG3 117 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 LYNX1G3V0Z9 82 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 K7EN84 100 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 IGLV1-47P01700 117 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 LYNX1P0DP58 116 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 FABP4P15090 132 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 HNF1AP20823 631 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PDLIM4P50479 330 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 BPIFB3P59826 476 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 SELENOTP62341 195 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 SSBP2P81877 361 aaPredicted RBP7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 OR8B3Q8NGG8 313 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TMEM37Q8WXS4 190 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 NPIPB3Q92617 1050 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 RITA1Q96K30 269 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 FAM167A-AS1Q96KT0 104 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 OR8B2Q96RD0 313 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 SLC25A2Q9BXI2 301 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 COL25A1Q9BXS0 654 aaPredicted RBP7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 DNAJC4Q9NNZ3 241 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 RAXQ9Y2V3 346 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 DMRT1Q9Y5R6 373 aa7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 EP300Q09472 2414 aaPredicted RBP7.52□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PPIAL4CA0A0B4J2A2 164 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 IGHV1-3A0A0C4DH29 117 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 HELTA6NFD8 242 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 LINC00587B1AMM8 73 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 BUB1B-PAK6H3BSN5 160 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CRYGCP07315 174 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 OR10J4P0C629 311 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PPIAL4GP0DN37 164 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CRYBB3P26998 211 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 GRNP28799 593 aaKnown RBP7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 GNG4P50150 75 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 UBE2L3P68036 154 aaKnown RBP7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 ADORA2A-AS1P86434 159 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PAX2Q02962 417 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TNXAQ16473 311 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CENPWQ5EE01 88 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 C10orf113Q5VZT2 155 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 OR5AU1Q8NGC0 362 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 SGMS2Q8NHU3 365 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PACRGQ96M98 296 aaPredicted RBP7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 HIST1H2BLQ99880 126 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TRAPPC1Q9Y5R8 145 aa7.51□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TRAV5A0A0B4J249 113 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 GGTLC3B5MD39 225 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 AMBPP02760 352 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 REG1AP05451 166 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 COX7A1P24310 79 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 COMPP49747 757 aaPredicted RBP7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CNN1P51911 297 aaKnown RBP7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 YPEL3P61236 119 aaPredicted RBP7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 ZNF90Q03938 601 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TIGITQ495A1 244 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PATE2Q6UY27 113 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 LY6G5BQ8NDX9 201 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 C22orf15Q8WYQ4 148 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 RPEQ96AT9 228 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 MISP3Q96FF7 219 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms