RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 IGFBPL1Q8WX77 278 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 SRSF12Q8WXF0 261 aaKnown RBP8.92□□□□□ -0.98
SKA2-204ENST00000578519 CFHR4Q92496 578 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 MISP3Q96FF7 219 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 EAF1Q96JC9 268 aaPredicted RBP8.92□□□□□ -0.98
SKA2-204ENST00000578519 OR4F4Q96R69 305 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 DNAJC4Q9NNZ3 241 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 THYN1Q9P016 225 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 NAT8Q9UHE5 227 aa8.92□□□□□ -0.98
SKA2-204ENST00000578519 PIEZO2Q9H5I5 2752 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 C11orf94C9JXX5 98 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 COX7A2P2O60397 106 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 PAGE4O60829 102 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 LINC00869P0C866 280 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 PAX1P15863 534 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 SLC25A16P16260 332 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 TMEM11P17152 192 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 S100A7P31151 101 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 KLRD1Q13241 179 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 FXYD3Q14802 87 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 C5orf64Q2M2E5 130 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 FAM78BQ5VT40 261 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 CST9LP1Q5W188 147 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 ZNF562Q6V9R5 426 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 SPNS3Q6ZMD2 512 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 TMEM190Q8WZ59 177 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 NPIPB3Q92617 1050 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 RITA1Q96K30 269 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 TRGV9Q99603 122 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 RASL11BQ9BPW5 248 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 CTDSP1Q9GZU7 261 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 RNF24Q9Y225 148 aa8.91□□□□□ -0.98
SKA2-204ENST00000578519 MGAQ8IWI9 3026 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 CELSR3Q9NYQ7 3312 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 TRAV30A0A087WSZ9 112 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 CGB1A6NKQ9 187 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 FAM74A7A6NL05 159 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 NCBP2LA6PVI3 153 aaKnown RBP8.9□□□□□ -0.98
SKA2-204ENST00000578519 NUPL2O15504 423 aaKnown RBP8.9□□□□□ -0.98
SKA2-204ENST00000578519 MT-ND4LP03901 98 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 CRYGCP07315 174 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 OR5G3P0C626 314 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 C8orf88P0DMB2 117 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 ATF4P18848 351 aaPredicted RBP8.9□□□□□ -0.98
SKA2-204ENST00000578519 GATA3P23771 443 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 GCHFRP30047 84 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 C10orf55Q5SWW7 151 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 SSX7Q7RTT5 188 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 LHFPL4Q7Z7J7 247 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 TMEM116Q8NCL8 245 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 RPUSD4Q96CM3 377 aaKnown RBP8.9□□□□□ -0.98
SKA2-204ENST00000578519 TMEM68Q96MH6 324 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 SMIM7Q9BQ49 75 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 TNFRSF19Q9NS68 423 aa8.9□□□□□ -0.98
SKA2-204ENST00000578519 LOC400499M0QZD8 3231 aa8.9□□□□□ -0.99
SKA2-204ENST00000578519 DIDO1Q9BTC0 2240 aaKnown RBP8.89□□□□□ -0.99
SKA2-204ENST00000578519 PIEZO1Q92508 2521 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 A0A1W2PRD5 423 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 A0A1W2PRF3 423 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 A0A1W2PRM7 423 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 TEX22C9J3V5 150 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 E7EUB6 86 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 NPFFO15130 113 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 HMGB3O15347 200 aaKnown RBP8.89□□□□□ -0.99
SKA2-204ENST00000578519 OR2C1O95371 312 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 ARL14EPLP0DKL9 152 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 HIST1H1BP16401 226 aaKnown RBP8.89□□□□□ -0.99
SKA2-204ENST00000578519 CNTFRP26992 372 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 RND2P52198 227 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 DLX1P56177 255 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 PAX8Q06710 450 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 RNF212Q495C1 297 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 C10orf113Q5VZT2 155 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 TMEM88Q6PEY1 159 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 OR2T6Q8NHC8 308 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 C17orf50Q8WW18 174 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 PERPQ96FX8 193 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 BTF3L4Q96K17 158 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 TBX15Q96SF7 602 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 WNT10AQ9GZT5 417 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 TMPRSS5Q9H3S3 457 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 SDF2L1Q9HCN8 221 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 TPSG1Q9NRR2 321 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 TMEM242Q9NWH2 141 aa8.89□□□□□ -0.99
SKA2-204ENST00000578519 ANKHD1Q8IWZ3 2542 aaKnown RBP8.89□□□□□ -0.99
SKA2-204ENST00000578519 PKDREJQ9NTG1 2253 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 MALRD1Q5VYJ5 2156 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 FRYQ5TBA9 3013 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 ZFHX4Q86UP3 3567 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 NPIPB5A8MRT5 1133 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 VWC2LB2RUY7 222 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 TGOLN2O43493 480 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 REG1AP05451 166 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 AREGP15514 252 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 CD81P60033 236 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 PRB3Q04118 309 aaPredicted RBP8.88□□□□□ -0.99
SKA2-204ENST00000578519 MRGPRG-AS1Q2M3A8 158 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 FAM90A2PQ658T7 463 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 CBLN2Q8IUK8 224 aa8.88□□□□□ -0.99
SKA2-204ENST00000578519 OR4X1Q8NH49 305 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms