RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 PCDH15Q96QU1 1955 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 PLXNA4Q9HCM2 1894 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 DPRXA6NFQ7 191 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 OR4C46A6NHA9 309 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 AMBPP02760 352 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 TFPI2P48307 235 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 PNKDQ8N490 385 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 OR4B1Q8NGF8 309 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
ERBB2-206ENST00000578373 GRAMD2BQ96HH9 432 aa10.04□□□□□ -0.8
ERBB2-206ENST00000578373 NBEAP1P0C6P0 100 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 ADMP35318 185 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 UQCR10Q9UDW1 63 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 CEACAM1P13688 526 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 MORN2Q502X0 79 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 C19orf35Q6ZS72 473 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 GTF3AQ92664 365 aaKnown RBP10.03□□□□□ -0.8
ERBB2-206ENST00000578373 RABAC1Q9UI14 185 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 TRAV5A0A0B4J249 113 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 A0A1B0GUS0 222 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 IFNL4K9M1U5 179 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 GFRA1P56159 465 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 SRSF4Q08170 494 aaKnown RBP10.03□□□□□ -0.8
ERBB2-206ENST00000578373 ZNF146Q15072 292 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 SCNM1Q9BWG6 230 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 KLK15Q9H2R5 256 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 IFI27L2Q9H2X8 130 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 IL36BQ9NZH7 164 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 CRIM1Q9NZV1 1036 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 IGHV3OR16-10A0A075B7F0 116 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 KBTBD11-OT1A0A1B0GTJ5 212 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 IQCF6A8MYZ5 107 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 AMY1AP04745 511 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 IL4P05112 153 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 MGPP08493 103 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 MC5RP33032 325 aa10.03□□□□□ -0.8
ERBB2-206ENST00000578373 DUTP33316 252 aaKnown RBP10.03□□□□□ -0.8
ERBB2-206ENST00000578373 IGF2RP11717 2491 aa10.02□□□□□ -0.8
ERBB2-206ENST00000578373 IGHV3-66A0A0C4DH42 116 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 OR2T8A6NH00 312 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 NTN3O00634 580 aaPredicted RBP10.02□□□□□ -0.81
ERBB2-206ENST00000578373 CKS2P33552 79 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 MBNL2Q5VZF2 373 aaKnown RBP10.02□□□□□ -0.81
ERBB2-206ENST00000578373 SPSB3Q6PJ21 355 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 OR4A5Q8NH83 315 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 SEPSECSQ9HD40 501 aaKnown RBP10.02□□□□□ -0.81
ERBB2-206ENST00000578373 F11RQ9Y624 299 aaKnown RBP10.02□□□□□ -0.81
ERBB2-206ENST00000578373 CCDC168Q8NDH2 2452 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 PPIAL4CA0A0B4J2A2 164 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 LINC00473A8K010 186 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 SAA1P0DJI8 122 aaPredicted RBP10.02□□□□□ -0.81
ERBB2-206ENST00000578373 PPIAL4GP0DN37 164 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 NRN1LQ496H8 165 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
ERBB2-206ENST00000578373 BTF3P20290 206 aaKnown RBP10.02□□□□□ -0.81
ERBB2-206ENST00000578373 B3GALT5-AS1P59052 145 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 LCN2P80188 198 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 MLANAQ16655 118 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 TCF24Q7RTU0 167 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 ZNF738Q8NE65 137 aa10.02□□□□□ -0.81
ERBB2-206ENST00000578373 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
ERBB2-206ENST00000578373 TMEM189A5PLL7 270 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 SPANXN1Q5VSR9 72 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 TMEM42Q69YG0 159 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 C18orf15Q96N68 181 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 MRPL37Q9BZE1 423 aaKnown RBP10.01□□□□□ -0.81
ERBB2-206ENST00000578373 ZNF207O43670 478 aaKnown RBP10.01□□□□□ -0.81
ERBB2-206ENST00000578373 TIMP3P35625 211 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 C1orf174Q8IYL3 243 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 MBD3L1Q8WWY6 194 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 ZCCHC14Q8WYQ9 949 aaKnown RBP10.01□□□□□ -0.81
ERBB2-206ENST00000578373 HSPB8Q9UJY1 196 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 WDR83OSQ9Y284 106 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 CEP295Q9C0D2 2601 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 EFNB3Q15768 340 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
ERBB2-206ENST00000578373 TMEM97Q5BJF2 176 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 TIMM23BQ5SRD1 257 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 TMEM170AQ8WVE7 144 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 TM4SF20Q53R12 229 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 OR5R1Q8NH85 324 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 NRN1Q9NPD7 142 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 ZNRD1Q9P1U0 126 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 PLXNA2O75051 1894 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 NCOR2Q9Y618 2525 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 A6NNC1 897 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 FOXH1O75593 365 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 BSPH1Q075Z2 132 aa10□□□□□ -0.81
ERBB2-206ENST00000578373 HIGD1CA8MV81 97 aa9.99□□□□□ -0.81
ERBB2-206ENST00000578373 RNFT1Q5M7Z0 435 aa9.99□□□□□ -0.81
ERBB2-206ENST00000578373 DGAT2L7PQ6IED9 249 aa9.99□□□□□ -0.81
ERBB2-206ENST00000578373 TEX38Q6PEX7 206 aa9.99□□□□□ -0.81
ERBB2-206ENST00000578373 DPF1Q92782 380 aa9.99□□□□□ -0.81
ERBB2-206ENST00000578373 IGKV3D-15A0A087WSY6 115 aa9.99□□□□□ -0.81
ERBB2-206ENST00000578373 JOSD1Q15040 202 aaPredicted RBP9.99□□□□□ -0.81
ERBB2-206ENST00000578373 CCDC144NLQ6NUI1 221 aa9.99□□□□□ -0.81
ERBB2-206ENST00000578373 FOLR2P14207 255 aa9.99□□□□□ -0.81
ERBB2-206ENST00000578373 FAM90A2PQ658T7 463 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms