RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 TMEM229BQ8NBD8 167 aa10.76□□□□□ -0.69
SMARCE1-213ENST00000578044 MRGPRFQ96AM1 343 aa10.76□□□□□ -0.69
SMARCE1-213ENST00000578044 GINS3Q9BRX5 216 aa10.76□□□□□ -0.69
SMARCE1-213ENST00000578044 C6orf62Q9GZU0 229 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-213ENST00000578044 KLK11Q9UBX7 282 aa10.76□□□□□ -0.69
SMARCE1-213ENST00000578044 ALMS1Q8TCU4 4167 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 HYDINQ4G0P3 5121 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 IGHV3-35A0A0C4DH35 117 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 CHEK1O14757 476 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 UCP1P25874 307 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 SUB1P53999 127 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 PIGPP57054 158 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 TAS2R19P59542 299 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 SURF2Q15527 256 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 GPR107Q5VW38 600 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 CCDC71LQ8N9Z2 235 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 RNF183Q96D59 192 aa10.75□□□□□ -0.69
SMARCE1-213ENST00000578044 TRAV14DV4A0A0A6YYC5 116 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 A0A0B4J293 547 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 C3orf85A0A1B0GTC6 90 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 GABARAPH6UMI1 98 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 SPRY2O43597 315 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 GNG7O60262 68 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 DFFBO76075 338 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 MT-CO2P00403 227 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 IGKV1-5P01602 117 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 CD3DP04234 171 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 SNCAP37840 140 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 MEF2DQ14814 521 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 BSXQ3C1V8 233 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 TMEM217Q8N7C4 229 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 STPG3Q8N7X2 389 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 UBAC2Q8NBM4 344 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 TMEM116Q8NCL8 245 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 DUSP18Q8NEJ0 188 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 OR52E5Q8NH55 327 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 OR52I2Q8NH67 350 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 ABHD1Q96SE0 405 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 BCL7BQ9BQE9 202 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 C20orf24Q9BUV8 137 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 VSIRQ9H7M9 311 aa10.74□□□□□ -0.69
SMARCE1-213ENST00000578044 FAM25AB3EWG3 89 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 FAM25CB3EWG5 89 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 FAM25GB3EWG6 89 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 M0QYG6 137 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 CTDSPLO15194 276 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 CTSDP07339 412 aaPredicted RBP10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 SMIM18P0DKX4 95 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 PAFAH1B2P68402 229 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 ZNF600Q6ZNG1 722 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 GATAD1Q8WUU5 269 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 MISP3Q96FF7 219 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 TP53RKQ96S44 253 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 RNF2Q99496 336 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 MAP6D1Q9H9H5 199 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 COPZ2Q9P299 210 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 EXTL2Q9UBQ6 330 aa10.73□□□□□ -0.69
SMARCE1-213ENST00000578044 NUPR2A6NF83 97 aa10.72□□□□□ -0.69
SMARCE1-213ENST00000578044 SCGB2A1O75556 95 aa10.72□□□□□ -0.69
SMARCE1-213ENST00000578044 CDS2O95674 445 aa10.72□□□□□ -0.69
SMARCE1-213ENST00000578044 PGAM2P15259 253 aa10.72□□□□□ -0.69
SMARCE1-213ENST00000578044 AKR1C2P52895 323 aa10.72□□□□□ -0.69
SMARCE1-213ENST00000578044 RRNAD1Q96FB5 475 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-213ENST00000578044 PDCD10Q9BUL8 212 aa10.72□□□□□ -0.69
SMARCE1-213ENST00000578044 TMEM231Q9H6L2 316 aa10.72□□□□□ -0.69
SMARCE1-213ENST00000578044 EPPK1P58107 5090 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-213ENST00000578044 ST8SIA3O43173 380 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 RAB3DO95716 219 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 TMEM50AO95807 157 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 ALDH3B2P48448 385 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 STEAP1BQ6NZ63 245 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 TOMM20LQ6UXN7 152 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 SLC35G3Q8N808 338 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 OR4X1Q8NH49 305 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 SMIM4Q8WVI0 70 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 MRPS26Q9BYN8 205 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 TMEM222Q9H0R3 208 aa10.71□□□□□ -0.69
SMARCE1-213ENST00000578044 TRAV30A0A087WSZ9 112 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 IGHV3-21A0A0B4J1V1 117 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 PIGBOS1A0A0B4J2F0 54 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 A0A1W2PS18 150 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 YIF1AO95070 293 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 IFNA17P01571 189 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 RNASE2P10153 161 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 SPCS3P61009 180 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 DHODHQ02127 395 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 LYG2Q86SG7 212 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 OR13C8Q8NGS7 320 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 CSTL1Q9H114 145 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 ZFAND3Q9H8U3 227 aa10.7□□□□□ -0.7
SMARCE1-213ENST00000578044 BIRC6Q9NR09 4857 aa10.69□□□□□ -0.7
SMARCE1-213ENST00000578044 CLN5O75503 358 aa10.69□□□□□ -0.7
SMARCE1-213ENST00000578044 HTR2BP41595 481 aa10.69□□□□□ -0.7
SMARCE1-213ENST00000578044 TMEM41BQ5BJD5 291 aa10.69□□□□□ -0.7
SMARCE1-213ENST00000578044 GLYATL2Q8WU03 294 aa10.69□□□□□ -0.7
SMARCE1-213ENST00000578044 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
SMARCE1-213ENST00000578044 RBPMSQ93062 196 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-213ENST00000578044 IL22RA2Q969J5 263 aa10.69□□□□□ -0.7
SMARCE1-213ENST00000578044 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms