RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ABHD17AQ96GS6 310 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 COL25A1Q9BXS0 654 aaPredicted RBP9.11□□□□□ -0.95
RPAIN-212ENST00000573126 FKBP11Q9NYL4 201 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 IL36BQ9NZH7 164 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 MUC6Q6W4X9 2439 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 C9JCJ5 164 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 PRRG2O14669 202 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 GCGP01275 180 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 SSBP2P81877 361 aaPredicted RBP9.11□□□□□ -0.95
RPAIN-212ENST00000573126 CD69Q07108 199 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 FLYWCH2Q96CP2 140 aaKnown RBP9.11□□□□□ -0.95
RPAIN-212ENST00000573126 RNASE7Q9H1E1 156 aaKnown RBP9.11□□□□□ -0.95
RPAIN-212ENST00000573126 NDUFA4L2Q9NRX3 87 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 TMEM167BQ9NRX6 74 aa9.11□□□□□ -0.95
RPAIN-212ENST00000573126 TECRQ9NZ01 308 aaKnown RBP9.11□□□□□ -0.95
RPAIN-212ENST00000573126 TACC2O95359 2948 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 SPTA1P02549 2419 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 TRAV5A0A0B4J249 113 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 THBDP07204 575 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 SNRPCP09234 159 aaKnown RBP9.1□□□□□ -0.95
RPAIN-212ENST00000573126 CD33P20138 364 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 FXYD3Q14802 87 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 MMD2Q8IY49 270 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 OR5AN1Q8NGI8 311 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 OR1L8Q8NGR8 309 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 TLN1Q9Y490 2541 aaKnown RBP9.1□□□□□ -0.95
RPAIN-212ENST00000573126 PPIAL4EA0A075B759 164 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 PPIAL4DF5H284 164 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 PPIAL4FP0DN26 164 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 IER3P46695 156 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 YPEL3P61236 119 aaPredicted RBP9.1□□□□□ -0.95
RPAIN-212ENST00000573126 SLC35B1P78383 322 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 TMEM30BQ3MIR4 351 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 ASPHD1Q5U4P2 390 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 OR8I2Q8N0Y5 310 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 SLC35E1Q96K37 410 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 PPIAL4AQ9Y536 164 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 V9GYV3 84 aa9.1□□□□□ -0.95
RPAIN-212ENST00000573126 ABCA1O95477 2261 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 A8MWP6 167 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 MKRN2OSH3BPM6 223 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 TMEM178BH3BS89 294 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 SCGB1D1O95968 90 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 OR5G3P0C626 314 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 WT1-ASQ06250 92 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 MEF2CQ06413 473 aaPredicted RBP9.09□□□□□ -0.95
RPAIN-212ENST00000573126 REC114Q7Z4M0 266 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 SLC25A33Q9BSK2 321 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 MRPL18Q9H0U6 180 aaKnown RBP9.09□□□□□ -0.95
RPAIN-212ENST00000573126 FCN1O00602 326 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 TCL1AP56279 114 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 TAS2R45P59539 299 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 ERHP84090 104 aaKnown RBP9.09□□□□□ -0.95
RPAIN-212ENST00000573126 SSX2Q16385 188 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 RPEL1Q2QD12 228 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 NHLRC2Q8NBF2 726 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 OR4C13Q8NGP0 309 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 OR1L6Q8NGR2 347 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 FNDC4Q9H6D8 234 aaPredicted RBP9.09□□□□□ -0.95
RPAIN-212ENST00000573126 CHODLQ9H9P2 273 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 TPSG1Q9NRR2 321 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 CTSZQ9UBR2 303 aa9.09□□□□□ -0.95
RPAIN-212ENST00000573126 IGHV3-72A0A0B4J1Y9 119 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 SNURFLB1AK76 121 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 DLL1O00548 723 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 REG1AP05451 166 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 C8orf88P0DMB2 117 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 DLX1P56177 255 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 LGALS4P56470 323 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 PRB3Q04118 309 aaPredicted RBP9.08□□□□□ -0.96
RPAIN-212ENST00000573126 TCF15Q12870 199 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 ZNF430Q9H8G1 570 aaPredicted RBP9.08□□□□□ -0.96
RPAIN-212ENST00000573126 TMEM106BQ9NUM4 274 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 TP53TG3Q9ULZ0 132 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 A0A1B0GV90 55 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 CGB1A6NKQ9 187 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 NDUFB3O43676 98 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 SLC25A17O43808 307 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 PYYP10082 97 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 MGST1P10620 155 aaKnown RBP9.08□□□□□ -0.96
RPAIN-212ENST00000573126 PAX1P15863 534 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 TDGF1P3P51864 188 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 UBE2L3P68036 154 aaKnown RBP9.08□□□□□ -0.96
RPAIN-212ENST00000573126 IQCJQ1A5X6 159 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 TIGITQ495A1 244 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 TMEM177Q53S58 311 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 ST6GALNAC3Q8NDV1 305 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 CMTM2Q8TAZ6 248 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 NPIPB3Q92617 1050 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 RITA1Q96K30 269 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 LINC00479Q96M42 142 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 MS4A10Q96PG2 267 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 LY96Q9Y6Y9 160 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 ZZEF1O43149 2961 aa9.08□□□□□ -0.96
RPAIN-212ENST00000573126 F2Z2F3 143 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 PLAUP00749 431 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 APELAP0DMC3 54 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 CRISP2P16562 243 aa9.07□□□□□ -0.96
RPAIN-212ENST00000573126 USF1P22415 310 aaPredicted RBP9.07□□□□□ -0.96
RPAIN-212ENST00000573126 LINC00310P59036 64 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms