RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SPCS3P61009 180 aa15.69■□□□□ 0.1
CHMP6-204ENST00000572778 SRPXP78539 464 aa15.69■□□□□ 0.1
CHMP6-204ENST00000572778 LCN12Q6JVE5 192 aa15.69■□□□□ 0.1
CHMP6-204ENST00000572778 LYZL2Q7Z4W2 148 aa15.69■□□□□ 0.1
CHMP6-204ENST00000572778 LGI3Q8N145 548 aa15.69■□□□□ 0.1
CHMP6-204ENST00000572778 OR52E5Q8NH55 327 aa15.69■□□□□ 0.1
CHMP6-204ENST00000572778 BSCL2Q96G97 398 aaPredicted RBP15.69■□□□□ 0.1
CHMP6-204ENST00000572778 SMAD5-AS1Q9Y6J3 95 aa15.69■□□□□ 0.1
CHMP6-204ENST00000572778 NAP1L6A6NFF2 107 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 I3L2K1 104 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 IGHV3-48P01763 117 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 SULT1A3P0DMM9 295 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 SULT1A4P0DMN0 295 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 VAMP1P23763 118 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 RBMS2Q15434 407 aaKnown RBP15.68■□□□□ 0.1
CHMP6-204ENST00000572778 SPSB3Q6PJ21 355 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 UNQ9165/PRO28630Q6UXU0 137 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 CACNG8Q8WXS5 425 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 ATP6V0BQ99437 205 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 B9D2Q9BPU9 175 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 CHRDL1Q9BU40 450 aa15.68■□□□□ 0.1
CHMP6-204ENST00000572778 A0A0B4J2A0 478 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 IZUMO1RA6ND01 250 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 CENPXA8MT69 81 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 CEBPZOSA8MTT3 80 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 F8W735 103 aaPredicted RBP15.67■□□□□ 0.1
CHMP6-204ENST00000572778 NXPH3O95157 252 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 RNASE2P10153 161 aaKnown RBP15.67■□□□□ 0.1
CHMP6-204ENST00000572778 IL7P13232 177 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 MFAP4P55083 255 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 CD300EQ496F6 205 aaPredicted RBP15.67■□□□□ 0.1
CHMP6-204ENST00000572778 AARDQ4LEZ3 155 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 TM4SF20Q53R12 229 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 CENPSQ8N2Z9 138 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 PALMDQ9NP74 551 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 HEYLQ9NQ87 328 aaPredicted RBP15.67■□□□□ 0.1
CHMP6-204ENST00000572778 SHPKQ9UHJ6 478 aa15.67■□□□□ 0.1
CHMP6-204ENST00000572778 TMEM213A2RRL7 107 aa15.66■□□□□ 0.1
CHMP6-204ENST00000572778 CBLN1P23435 193 aa15.66■□□□□ 0.1
CHMP6-204ENST00000572778 OR2K2Q8NGT1 345 aa15.66■□□□□ 0.1
CHMP6-204ENST00000572778 ZNF436Q9C0F3 470 aaPredicted RBP15.66■□□□□ 0.1
CHMP6-204ENST00000572778 GAR1Q9NY12 217 aaKnown RBP15.66■□□□□ 0.1
CHMP6-204ENST00000572778 UFC1Q9Y3C8 167 aa15.66■□□□□ 0.1
CHMP6-204ENST00000572778 PIGBOS1A0A0B4J2F0 54 aa15.65■□□□□ 0.1
CHMP6-204ENST00000572778 A8MWP6 167 aa15.65■□□□□ 0.1
CHMP6-204ENST00000572778 ADMP35318 185 aa15.65■□□□□ 0.1
CHMP6-204ENST00000572778 PPP1R1AQ13522 171 aa15.65■□□□□ 0.1
CHMP6-204ENST00000572778 DEFB114Q30KQ6 69 aa15.65■□□□□ 0.1
CHMP6-204ENST00000572778 NMSQ5H8A3 153 aa15.65■□□□□ 0.1
CHMP6-204ENST00000572778 UXS1Q8NBZ7 420 aa15.65■□□□□ 0.1
CHMP6-204ENST00000572778 TXN2Q99757 166 aa15.65■□□□□ 0.1
CHMP6-204ENST00000572778 TECRQ9NZ01 308 aaKnown RBP15.65■□□□□ 0.1
CHMP6-204ENST00000572778 SELENOKQ9Y6D0 94 aa15.65■□□□□ 0.1
CHMP6-204ENST00000572778 A6NHS1 94 aa15.64■□□□□ 0.09
CHMP6-204ENST00000572778 NUPL2O15504 423 aaKnown RBP15.64■□□□□ 0.09
CHMP6-204ENST00000572778 NDUFB6O95139 128 aa15.64■□□□□ 0.09
CHMP6-204ENST00000572778 SFT2D2O95562 160 aa15.64■□□□□ 0.09
CHMP6-204ENST00000572778 CTSGP08311 255 aa15.64■□□□□ 0.09
CHMP6-204ENST00000572778 SMCO1Q147U7 214 aa15.64■□□□□ 0.09
CHMP6-204ENST00000572778 CNPY1Q3B7I2 92 aa15.64■□□□□ 0.09
CHMP6-204ENST00000572778 ANKRD55Q3KP44 614 aa15.64■□□□□ 0.09
CHMP6-204ENST00000572778 C7orf50Q9BRJ6 194 aaKnown RBP15.64■□□□□ 0.09
CHMP6-204ENST00000572778 C20orf24Q9BUV8 137 aa15.64■□□□□ 0.09
CHMP6-204ENST00000572778 CACFD1Q9UGQ2 172 aa15.64■□□□□ 0.09
CHMP6-204ENST00000572778 CORTO00230 105 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 NDUFA4O00483 81 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 GNG7O60262 68 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 FCGR2BP31994 310 aaPredicted RBP15.63■□□□□ 0.09
CHMP6-204ENST00000572778 HTR2BP41595 481 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 ELLP55199 621 aaPredicted RBP15.63■□□□□ 0.09
CHMP6-204ENST00000572778 GUCA2BQ16661 112 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 PVRIGQ6DKI7 326 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 GTSCR1Q86UQ5 136 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 Q8N1Y9 231 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 DUSP18Q8NEJ0 188 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 TMEM190Q8WZ59 177 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 HIPK2Q9H2X6 1198 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 FLVCR2Q9UPI3 526 aa15.63■□□□□ 0.09
CHMP6-204ENST00000572778 DUXBA0A1W2PPF3 345 aa15.62■□□□□ 0.09
CHMP6-204ENST00000572778 OPRK1P41145 380 aa15.62■□□□□ 0.09
CHMP6-204ENST00000572778 NPBWR1P48145 328 aa15.62■□□□□ 0.09
CHMP6-204ENST00000572778 RELQ04864 619 aaPredicted RBP15.62■□□□□ 0.09
CHMP6-204ENST00000572778 BSXQ3C1V8 233 aa15.62■□□□□ 0.09
CHMP6-204ENST00000572778 OR1S1Q8NH92 325 aa15.62■□□□□ 0.09
CHMP6-204ENST00000572778 MARC2Q969Z3 335 aa15.62■□□□□ 0.09
CHMP6-204ENST00000572778 ASCL2Q99929 193 aa15.62■□□□□ 0.09
CHMP6-204ENST00000572778 MRPL27Q9P0M9 148 aaKnown RBP15.62■□□□□ 0.09
CHMP6-204ENST00000572778 MLXQ9UH92 298 aa15.62■□□□□ 0.09
CHMP6-204ENST00000572778 IGHV3OR16-8A0A075B7F1 116 aa15.61■□□□□ 0.09
CHMP6-204ENST00000572778 A0A1B0GU03 582 aa15.61■□□□□ 0.09
CHMP6-204ENST00000572778 YIF1AO95070 293 aa15.61■□□□□ 0.09
CHMP6-204ENST00000572778 BTCP35070 178 aa15.61■□□□□ 0.09
CHMP6-204ENST00000572778 TNFRSF9Q07011 255 aa15.61■□□□□ 0.09
CHMP6-204ENST00000572778 BTNL8Q6UX41 500 aa15.61■□□□□ 0.09
CHMP6-204ENST00000572778 LRTM2Q8N967 370 aa15.61■□□□□ 0.09
CHMP6-204ENST00000572778 DNAH9Q9NYC9 4486 aa15.6■□□□□ 0.09
CHMP6-204ENST00000572778 ZNF785A8K8V0 405 aa15.6■□□□□ 0.09
CHMP6-204ENST00000572778 ZNF207O43670 478 aaKnown RBP15.6■□□□□ 0.09
CHMP6-204ENST00000572778 C8orf88P0DMB2 117 aa15.6■□□□□ 0.09
CHMP6-204ENST00000572778 UBE2MP61081 183 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms