RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 SNCAP37840 140 aa7.35□□□□□ -1.23
TVP23A-205ENST00000572428 ACSF3Q4G176 576 aaPredicted RBP7.35□□□□□ -1.23
TVP23A-205ENST00000572428 FAM57AQ8TBR7 257 aa7.35□□□□□ -1.23
TVP23A-205ENST00000572428 OR51E1Q8TCB6 317 aa7.35□□□□□ -1.23
TVP23A-205ENST00000572428 ADAT3Q96EY9 351 aaPredicted RBP7.35□□□□□ -1.23
TVP23A-205ENST00000572428 CABLES2Q9BTV7 478 aa7.35□□□□□ -1.23
TVP23A-205ENST00000572428 RER1O15258 196 aa7.35□□□□□ -1.23
TVP23A-205ENST00000572428 CA1P00915 261 aaPredicted RBP7.35□□□□□ -1.23
TVP23A-205ENST00000572428 SRYQ05066 204 aa7.35□□□□□ -1.23
TVP23A-205ENST00000572428 OR4C16Q8NGL9 310 aa7.35□□□□□ -1.23
TVP23A-205ENST00000572428 NABP1Q96AH0 204 aa7.35□□□□□ -1.23
TVP23A-205ENST00000572428 WDR61Q9GZS3 305 aaKnown RBP7.35□□□□□ -1.23
TVP23A-205ENST00000572428 GPR84Q9NQS5 396 aa7.35□□□□□ -1.23
TVP23A-205ENST00000572428 ACACAQ13085 2346 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 CREBL2O60519 120 aaPredicted RBP7.34□□□□□ -1.23
TVP23A-205ENST00000572428 KBTBD11O94819 623 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 TBC1D26Q86UD7 250 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 DEFB125Q8N687 156 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 C3orf56Q8N813 242 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 OR1F12Q8NHA8 337 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 SPACA5Q96QH8 159 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 PRRG4Q9BZD6 226 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 RCL1Q9Y2P8 373 aaKnown RBP7.34□□□□□ -1.23
TVP23A-205ENST00000572428 IGHV2-26A0A0B4J1V2 119 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 MUC21A0A0G2JKD1 596 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 LMX1BO60663 402 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 IGLV3-1P01715 115 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 SLC25A6P12236 298 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 QRFPP83859 136 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 FAM27BQ5VT28 67 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 ZNF626Q68DY1 528 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 SEM1Q6ZVN7 128 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 AAED1Q7RTV5 226 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 RAB39BQ96DA2 213 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 SPIN2AQ99865 258 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 SPIN2BQ9BPZ2 258 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 SLC25A21Q9BQT8 299 aaPredicted RBP7.34□□□□□ -1.23
TVP23A-205ENST00000572428 ZFAND3Q9H8U3 227 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 KCNS2Q9ULS6 477 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 SHANK1Q9Y566 2161 aa7.34□□□□□ -1.23
TVP23A-205ENST00000572428 NCOA6Q14686 2063 aaPredicted RBP7.34□□□□□ -1.23
TVP23A-205ENST00000572428 DUXBA0A1W2PPF3 345 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 ZNF93P35789 620 aaPredicted RBP7.33□□□□□ -1.24
TVP23A-205ENST00000572428 SLC38A11Q08AI6 406 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 SYT8Q8NBV8 401 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 C11orf45Q8TAV5 145 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 AQP3Q92482 292 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 RND1Q92730 232 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 SPTSSAQ969W0 71 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 ZNF471Q9BX82 626 aaPredicted RBP7.33□□□□□ -1.24
TVP23A-205ENST00000572428 ZNF71Q9NQZ8 489 aaPredicted RBP7.33□□□□□ -1.24
TVP23A-205ENST00000572428 CYSLTR1Q9Y271 337 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 TPRP12270 2363 aaKnown RBP7.33□□□□□ -1.24
TVP23A-205ENST00000572428 CYB5AP00167 134 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 FCGR3AP08637 254 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 SLC35B1P78383 322 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 COL10A1Q03692 680 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 FAM215AQ9Y5M1 114 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 ANKRD11Q6UB99 2663 aaPredicted RBP7.33□□□□□ -1.24
TVP23A-205ENST00000572428 TMEM14DPA8MWL7 114 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 SPRY3O43610 288 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 SRP14P37108 136 aaKnown RBP7.33□□□□□ -1.24
TVP23A-205ENST00000572428 PRR20EP86478 221 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 PRR20CP86479 221 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 PRR20DP86480 221 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 PRR20BP86481 221 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 PRR20AP86496 221 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 FAM57BQ71RH2 274 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 MOB1BQ7L9L4 216 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 OR4F17Q8NGA8 305 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 MBD6Q96DN6 1003 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 HIST1H2AAQ96QV6 131 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 OR4F4Q96R69 305 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 CDH20Q9HBT6 801 aa7.33□□□□□ -1.24
TVP23A-205ENST00000572428 CGAP01215 116 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 CD3DP04234 171 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 ORM2P19652 201 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 ZNF92Q03936 586 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 OR5AS1Q8N127 324 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 ZCCHC24Q8N2G6 241 aaKnown RBP7.32□□□□□ -1.24
TVP23A-205ENST00000572428 PAQR4Q8N4S7 273 aaPredicted RBP7.32□□□□□ -1.24
TVP23A-205ENST00000572428 OR5P3Q8WZ94 311 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 GGTLC1Q9BX51 225 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 OR2H1Q9GZK4 316 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 IL36GQ9NZH8 169 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 MGAQ8IWI9 3026 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 TRBV9A0A0B4J1U6 114 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 ZNHIT1O43257 154 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 MRPL33O75394 65 aaKnown RBP7.32□□□□□ -1.24
TVP23A-205ENST00000572428 DHRS3O75911 302 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 VSIG8P0DPA2 414 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 EVI2AP22794 236 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 CD34P28906 385 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 ZNF146Q15072 292 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 KRTAP27-1Q3LI81 207 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 SPATA45Q537H7 98 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 STUMQ69YW2 141 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 ZNF584Q8IVC4 421 aa7.32□□□□□ -1.24
TVP23A-205ENST00000572428 C9orf106Q8NAJ2 232 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms