RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 GGNQ86UU5 652 aa17.24■□□□□ 0.35
EDC4-204ENST00000572221 DOCK6Q96HP0 2047 aa17.24■□□□□ 0.35
EDC4-204ENST00000572221 IGHV3-66A0A0C4DH42 116 aa17.24■□□□□ 0.35
EDC4-204ENST00000572221 SUMO2P61956 95 aaKnown RBP17.24■□□□□ 0.35
EDC4-204ENST00000572221 COLCA1Q6ZS62 124 aa17.24■□□□□ 0.35
EDC4-204ENST00000572221 LCTP09848 1927 aa17.24■□□□□ 0.35
EDC4-204ENST00000572221 TRAV14DV4A0A0A6YYC5 116 aa17.23■□□□□ 0.35
EDC4-204ENST00000572221 PRR32B1ATL7 298 aa17.23■□□□□ 0.35
EDC4-204ENST00000572221 ZNF600Q6ZNG1 722 aa17.23■□□□□ 0.35
EDC4-204ENST00000572221 ITLN2Q8WWU7 325 aaPredicted RBP17.23■□□□□ 0.35
EDC4-204ENST00000572221 IGHV1-46P01743 117 aa17.23■□□□□ 0.35
EDC4-204ENST00000572221 ID3Q02535 119 aa17.23■□□□□ 0.35
EDC4-204ENST00000572221 SRRM5B3KS81 715 aa17.23■□□□□ 0.35
EDC4-204ENST00000572221 DDTP30046 118 aa17.23■□□□□ 0.35
EDC4-204ENST00000572221 FOXA3P55318 350 aaPredicted RBP17.23■□□□□ 0.35
EDC4-204ENST00000572221 PRCDQ00LT1 54 aa17.23■□□□□ 0.35
EDC4-204ENST00000572221 DUX3Q96PT4 197 aa17.23■□□□□ 0.35
EDC4-204ENST00000572221 MST1P26927 711 aa17.22■□□□□ 0.35
EDC4-204ENST00000572221 DUTP33316 252 aaKnown RBP17.22■□□□□ 0.35
EDC4-204ENST00000572221 ATP5G3P48201 142 aa17.22■□□□□ 0.35
EDC4-204ENST00000572221 PAQR4Q8N4S7 273 aaPredicted RBP17.22■□□□□ 0.35
EDC4-204ENST00000572221 ASCL2Q99929 193 aa17.22■□□□□ 0.35
EDC4-204ENST00000572221 SDF2L1Q9HCN8 221 aa17.22■□□□□ 0.35
EDC4-204ENST00000572221 YAE1D1Q9NRH1 226 aa17.22■□□□□ 0.35
EDC4-204ENST00000572221 RALGAPA1Q6GYQ0 2036 aa17.22■□□□□ 0.35
EDC4-204ENST00000572221 DSCR9P59020 149 aa17.22■□□□□ 0.35
EDC4-204ENST00000572221 ALKBH7Q9BT30 221 aaPredicted RBP17.22■□□□□ 0.35
EDC4-204ENST00000572221 EFNA2O43921 213 aa17.22■□□□□ 0.35
EDC4-204ENST00000572221 ZNF324BQ6AW86 544 aaPredicted RBP17.22■□□□□ 0.35
EDC4-204ENST00000572221 FER1L6-AS1Q8NA97 138 aa17.22■□□□□ 0.35
EDC4-204ENST00000572221 OTX1P32242 354 aaPredicted RBP17.21■□□□□ 0.35
EDC4-204ENST00000572221 RNF125Q96EQ8 232 aa17.21■□□□□ 0.35
EDC4-204ENST00000572221 ACACAQ13085 2346 aa17.21■□□□□ 0.35
EDC4-204ENST00000572221 CACNA1DQ01668 2161 aa17.21■□□□□ 0.35
EDC4-204ENST00000572221 KCNS1Q96KK3 526 aa17.21■□□□□ 0.35
EDC4-204ENST00000572221 A8MXK9 166 aa17.21■□□□□ 0.35
EDC4-204ENST00000572221 BTCP35070 178 aa17.21■□□□□ 0.35
EDC4-204ENST00000572221 PLAURQ03405 335 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 TMEM190Q8WZ59 177 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 RNF126Q9BV68 326 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 DPRXA6NFQ7 191 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 TMEM262E9PQX1 116 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 CCL20P78556 96 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 NABP1Q96AH0 204 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 MDC1Q14676 2089 aaKnown RBP17.2■□□□□ 0.34
EDC4-204ENST00000572221 TCRBV4S1A1TA0A5B7 111 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 FABP5P3A8MUU1 101 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 SLC17A3O00476 420 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 TCF21O43680 179 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 RPUSD1Q9UJJ7 312 aaKnown RBP17.2■□□□□ 0.34
EDC4-204ENST00000572221 A0A0G2JMZ2 1700 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 LRRC37A2A6NM11 1700 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 FAM166AQ6J272 317 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 FGFBP3Q8TAT2 258 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 DOCK4Q8N1I0 1966 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 A0A1W2PRE2 83 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 IGHV3-11P01762 117 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 OR9G9P0C7N8 305 aa17.2■□□□□ 0.34
EDC4-204ENST00000572221 GATA2P23769 480 aaPredicted RBP17.2■□□□□ 0.34
EDC4-204ENST00000572221 IZUMO1RA6ND01 250 aa17.19■□□□□ 0.34
EDC4-204ENST00000572221 VDAC2P45880 294 aaPredicted RBP17.19■□□□□ 0.34
EDC4-204ENST00000572221 IGKV3OR2-268A0A0C4DH90 116 aa17.19■□□□□ 0.34
EDC4-204ENST00000572221 DUSP14O95147 198 aaKnown RBP17.19■□□□□ 0.34
EDC4-204ENST00000572221 SOD3P08294 240 aa17.19■□□□□ 0.34
EDC4-204ENST00000572221 TMEM170BQ5T4T1 132 aa17.19■□□□□ 0.34
EDC4-204ENST00000572221 ORMDL3Q8N138 153 aa17.19■□□□□ 0.34
EDC4-204ENST00000572221 DMRTA2Q96SC8 542 aa17.19■□□□□ 0.34
EDC4-204ENST00000572221 C2orf88Q9BSF0 95 aa17.19■□□□□ 0.34
EDC4-204ENST00000572221 PDCD11Q14690 1871 aaKnown RBP17.18■□□□□ 0.34
EDC4-204ENST00000572221 RIF1Q5UIP0 2472 aaKnown RBP17.18■□□□□ 0.34
EDC4-204ENST00000572221 FOXF2Q12947 444 aa17.18■□□□□ 0.34
EDC4-204ENST00000572221 MESP1Q9BRJ9 268 aa17.18■□□□□ 0.34
EDC4-204ENST00000572221 DMRT1Q9Y5R6 373 aa17.18■□□□□ 0.34
EDC4-204ENST00000572221 APOHP02749 345 aaPredicted RBP17.18■□□□□ 0.34
EDC4-204ENST00000572221 RHOGP84095 191 aa17.18■□□□□ 0.34
EDC4-204ENST00000572221 ZCCHC24Q8N2G6 241 aaKnown RBP17.18■□□□□ 0.34
EDC4-204ENST00000572221 LINC01587Q99440 93 aa17.18■□□□□ 0.34
EDC4-204ENST00000572221 CHD5Q8TDI0 1954 aa17.18■□□□□ 0.34
EDC4-204ENST00000572221 PLP1P60201 277 aa17.17■□□□□ 0.34
EDC4-204ENST00000572221 TMEM160Q9NX00 188 aa17.17■□□□□ 0.34
EDC4-204ENST00000572221 LY6G6FQ5SQ64 297 aa17.17■□□□□ 0.34
EDC4-204ENST00000572221 TCF23Q7RTU1 214 aa17.17■□□□□ 0.34
EDC4-204ENST00000572221 SCGB3A1Q96QR1 104 aa17.17■□□□□ 0.34
EDC4-204ENST00000572221 WDR83OSQ9Y284 106 aa17.17■□□□□ 0.34
EDC4-204ENST00000572221 PSMB11A5LHX3 300 aa17.17■□□□□ 0.34
EDC4-204ENST00000572221 TIMM23O14925 209 aa17.17■□□□□ 0.34
EDC4-204ENST00000572221 ZNF672Q499Z4 452 aaPredicted RBP17.17■□□□□ 0.34
EDC4-204ENST00000572221 LEMD1Q68G75 181 aa17.17■□□□□ 0.34
EDC4-204ENST00000572221 IGKV1-12A0A0C4DH73 117 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 OOSP1A8MZH6 123 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 RAMP3O60896 148 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 IGKV1D-12P01611 117 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 HEPN1Q6WQI6 88 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 ZNF257Q9Y2Q1 563 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 H3BRM9 83 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 GAS1P54826 345 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 SPTBN1Q01082 2364 aaKnown RBP17.16■□□□□ 0.34
EDC4-204ENST00000572221 WNT2P09544 360 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 EFNA4P52798 201 aa17.16■□□□□ 0.34
EDC4-204ENST00000572221 F11RQ9Y624 299 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms