RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 ECSCRQ19T08 205 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 FAM209BQ5JX69 171 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 ASPHD1Q5U4P2 390 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 EIF5AL1Q6IS14 154 aaKnown RBP9.38□□□□□ -0.91
CDRT1-206ENST00000571263 COMMD1Q8N668 190 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 TMEM217Q8N7C4 229 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 SCGB1C1Q8TD33 95 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 ATP6V0BQ99437 205 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 ATP5SQ99766 215 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 TMEM147Q9BVK8 224 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 UQCC1Q9NVA1 299 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 GAR1Q9NY12 217 aaKnown RBP9.38□□□□□ -0.91
CDRT1-206ENST00000571263 FBXL17Q9UF56 701 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 FBXO7Q9Y3I1 522 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 VPS13CQ709C8 3753 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 IGLV11-55A0A075B6I3 123 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 FAM181BA6NEQ2 426 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 CYSRT1A8MQ03 144 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 PRSS46E5RG02 174 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 REG1AP05451 166 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 PPIFP30405 207 aaKnown RBP9.37□□□□□ -0.91
CDRT1-206ENST00000571263 OPRK1P41145 380 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 VWC2Q2TAL6 325 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 C19orf54Q5BKX5 351 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 UBAC2Q8NBM4 344 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 NECAP1Q8NC96 275 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 OR5T1Q8NG75 326 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 TMEM170AQ8WVE7 144 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 SLC35E1Q96K37 410 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 CXorf58Q96LI9 332 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 TXN2Q99757 166 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 ZNF471Q9BX82 626 aaPredicted RBP9.37□□□□□ -0.91
CDRT1-206ENST00000571263 C16orf95Q9H693 158 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 ZNF702PQ9H963 129 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 ESM1Q9NQ30 184 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 CSMD1Q96PZ7 3565 aa9.37□□□□□ -0.91
CDRT1-206ENST00000571263 TRAV30A0A087WSZ9 112 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 TRBV9A0A0B4J1U6 114 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 A0A0G2JLM5 398 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 SH2D7A6NKC9 451 aaPredicted RBP9.36□□□□□ -0.91
CDRT1-206ENST00000571263 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 NDUFA7O95182 113 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 APELAP0DMC3 54 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 TPT1P13693 172 aaKnown RBP9.36□□□□□ -0.91
CDRT1-206ENST00000571263 TEX38Q6PEX7 206 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 TMEM144Q7Z5S9 345 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 HAPLN4Q86UW8 402 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 STOML3Q8TAV4 291 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
CDRT1-206ENST00000571263 MISP3Q96FF7 219 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 USMG5Q96IX5 58 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 ZNF355PQ9NSJ1 428 aa9.36□□□□□ -0.91
CDRT1-206ENST00000571263 FLNAP21333 2647 aaKnown RBP9.36□□□□□ -0.91
CDRT1-206ENST00000571263 TET2Q6N021 2002 aaPredicted RBP9.36□□□□□ -0.91
CDRT1-206ENST00000571263 NAV3Q8IVL0 2385 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 A0A1B0GUS0 222 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 C17orf112F2Z3M2 114 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 G3V318 75 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 MT-CO2P00403 227 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 IGHG4P01861 327 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 ELANEP08246 267 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 FCGR2BP31994 310 aaPredicted RBP9.35□□□□□ -0.91
CDRT1-206ENST00000571263 NPBWR1P48145 328 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 ARL16Q0P5N6 197 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 CLINT1Q14677 625 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 Q6ZSV7 163 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 SLC16A13Q7RTY0 426 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 CENPVQ7Z7K6 275 aaPredicted RBP9.35□□□□□ -0.91
CDRT1-206ENST00000571263 BAP18Q8IXM2 172 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 PHYHIPLQ96FC7 376 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 FANCD2OSQ96PS1 177 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 DUX5Q96PT3 197 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 SMIM3Q9BZL3 60 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 CYTL1Q9NRR1 136 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 KCNIP2Q9NS61 270 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 FBXL7Q9UJT9 491 aa9.35□□□□□ -0.91
CDRT1-206ENST00000571263 NOTCH2Q04721 2471 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 TRBV7-1A0A0A6YYK4 115 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 PSMB11A5LHX3 300 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 I3L2K1 104 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 FABP1P07148 127 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 MFAP2P55001 183 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 MFAP4P55083 255 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 CFHR3Q02985 330 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 AKR1C1Q04828 323 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 ATP5G2Q06055 141 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 Q6ZS46 218 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 ZNF709Q8N972 641 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 TMEM116Q8NCL8 245 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 OR4F5Q8NH21 305 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 OR4X1Q8NH49 305 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 ARV1Q9H2C2 271 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 WDR83OSQ9Y284 106 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 TIMM9Q9Y5J7 89 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 CSPG4Q6UVK1 2322 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms