RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 F11RQ9Y624 299 aaKnown RBP12.77□□□□□ -0.37
CIITA-204ENST00000570546 IGHV3-35A0A0C4DH35 117 aa12.77□□□□□ -0.37
CIITA-204ENST00000570546 FBLL1A6NHQ2 334 aaKnown RBP12.77□□□□□ -0.37
CIITA-204ENST00000570546 FOXI3A8MTJ6 420 aaPredicted RBP12.77□□□□□ -0.37
CIITA-204ENST00000570546 M0R3E3 92 aa12.77□□□□□ -0.37
CIITA-204ENST00000570546 PRCDQ00LT1 54 aa12.77□□□□□ -0.37
CIITA-204ENST00000570546 TREML4Q6UXN2 200 aa12.77□□□□□ -0.37
CIITA-204ENST00000570546 NDUFAF3Q9BU61 184 aa12.77□□□□□ -0.37
CIITA-204ENST00000570546 TRBV6-6A0A0A6YYG2 114 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 HIGD1CA8MV81 97 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 JOSD1Q15040 202 aaPredicted RBP12.76□□□□□ -0.37
CIITA-204ENST00000570546 MST1LQ2TV78 715 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 OR1N2Q8NGR9 330 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 NRN1Q9NPD7 142 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 RP1P56715 2156 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 PSPNO60542 156 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 SFTPCP11686 197 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 ASCL4Q6XD76 172 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 EEF1AKMT3Q96AZ1 226 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 PHLDA3Q9Y5J5 127 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 C7orf71A4D174 169 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 TEX38Q6PEX7 206 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 OSTCQ9NRP0 149 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 LILRA1O75019 489 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 WISP1O95388 367 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 APOHP02749 345 aaPredicted RBP12.76□□□□□ -0.37
CIITA-204ENST00000570546 Q6ZS49 121 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 DPM3Q9P2X0 92 aa12.76□□□□□ -0.37
CIITA-204ENST00000570546 A0A1B0GUT8 65 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 IL18BPO95998 194 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 IGKV1D-33P01593 117 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 IGKV1-33P01594 117 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 STAG3L2P0CL84 134 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 EBLN2Q6P2I7 272 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 NPPCP23582 126 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 CLEC2AQ6UVW9 174 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 TMEM14EPQ6UXP3 125 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 PRELID3AQ96N28 172 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 RPP25LQ8N5L8 163 aaKnown RBP12.75□□□□□ -0.37
CIITA-204ENST00000570546 GPR82Q96P67 336 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 TMEM238LA0A1B0GVL6 79 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 A6NJY4 79 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 FOXF2Q12947 444 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 CHODLQ9H9P2 273 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 A0A1W2PRE2 83 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 Q6P435 159 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 TMEM136Q6ZRR5 245 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 SYT8Q8NBV8 401 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 ZNF524Q96C55 264 aa12.75□□□□□ -0.37
CIITA-204ENST00000570546 PYYP10082 97 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 CD69Q07108 199 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 DYNLRB2Q8TF09 96 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 HIST1H4GQ99525 98 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 GGTLC1Q9BX51 225 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 ANAPC10Q9UM13 185 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 FRMPD3Q5JV73 1810 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 TCRBV4S1A1TA0A5B7 111 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 ST6GALNAC6Q969X2 333 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 ZNF414Q96IQ9 312 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
CIITA-204ENST00000570546 FAM53AQ6NSI3 398 aaPredicted RBP12.74□□□□□ -0.37
CIITA-204ENST00000570546 MDC1Q14676 2089 aaKnown RBP12.74□□□□□ -0.37
CIITA-204ENST00000570546 TRBV20OR9-2A0A075B6H5 130 aa12.73□□□□□ -0.37
CIITA-204ENST00000570546 AMBPP02760 352 aa12.73□□□□□ -0.37
CIITA-204ENST00000570546 STAG3L3P0CL85 134 aa12.73□□□□□ -0.37
CIITA-204ENST00000570546 GNB1LQ9BYB4 327 aa12.73□□□□□ -0.37
CIITA-204ENST00000570546 SSBP4Q9BWG4 385 aaPredicted RBP12.73□□□□□ -0.37
CIITA-204ENST00000570546 GPX1P07203 203 aa12.73□□□□□ -0.37
CIITA-204ENST00000570546 DLX6P56179 175 aa12.73□□□□□ -0.37
CIITA-204ENST00000570546 EPDR1Q9UM22 224 aa12.73□□□□□ -0.37
CIITA-204ENST00000570546 A0A0G2JRQ6 117 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 SRRM5B3KS81 715 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 PLP1P60201 277 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 CD177Q8N6Q3 437 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 BMPERQ8N8U9 685 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 AGMATQ9BSE5 352 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 A0A1B0GW15 77 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 TIMP3P35625 211 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 SPATA31B1PQ5VZV4 182 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 LINC00469Q8N7U9 141 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 C21orf62Q9NYP8 219 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 FBXL7Q9UJT9 491 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 A1L4Q6 167 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 KLK15Q9H2R5 256 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 ANAPC1Q9H1A4 1944 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 IGHV3OR16-13A0A075B7E8 117 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 IGHV3-74A0A0B4J1X5 117 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 ETV2O00321 342 aaPredicted RBP12.72□□□□□ -0.37
CIITA-204ENST00000570546 IGHV1-46P01743 117 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 CD59P13987 128 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 OR10J3Q5JRS4 329 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 ARPC1AQ92747 370 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 ABHD17AQ96GS6 310 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 MGST2Q99735 147 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
CIITA-204ENST00000570546 MUC21A0A0G2JKD1 596 aa12.71□□□□□ -0.37
CIITA-204ENST00000570546 MUC21A0A140T8X8 626 aa12.71□□□□□ -0.37
CIITA-204ENST00000570546 LY6EQ16553 131 aa12.71□□□□□ -0.37
CIITA-204ENST00000570546 MUC21Q5SSG8 566 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms