RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 NXF2Q9GZY0 626 aaKnown RBP12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 CCDC59Q9P031 241 aaKnown RBP12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 LOC102724200A0A096LPH7 203 aaPredicted RBP12.73□□□□□ -0.37
MAP1LC3B-208ENST00000570189 LCE6AA0A183 80 aa12.73□□□□□ -0.37
MAP1LC3B-208ENST00000570189 PI3P19957 117 aa12.73□□□□□ -0.37
MAP1LC3B-208ENST00000570189 TMBIM6P55061 237 aa12.73□□□□□ -0.37
MAP1LC3B-208ENST00000570189 SPCS2Q15005 226 aa12.73□□□□□ -0.37
MAP1LC3B-208ENST00000570189 OR13C8Q8NGS7 320 aa12.73□□□□□ -0.37
MAP1LC3B-208ENST00000570189 RETNQ9HD89 108 aa12.73□□□□□ -0.37
MAP1LC3B-208ENST00000570189 COPZ2Q9P299 210 aa12.73□□□□□ -0.37
MAP1LC3B-208ENST00000570189 IGHV3-21A0A0B4J1V1 117 aa12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 CTDSP2O14595 271 aa12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 MT-CO2P00403 227 aa12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 RNASE12Q5GAN4 147 aaKnown RBP12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 WFDC3Q8IUB2 231 aa12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 FAM219AQ8IW50 185 aa12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 UBAC2Q8NBM4 344 aa12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 DYNC2LI1Q8TCX1 351 aa12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 SMPXQ9UHP9 88 aa12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 TP53TG1Q9Y2A0 90 aa12.72□□□□□ -0.37
MAP1LC3B-208ENST00000570189 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 OR4C46A6NHA9 309 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 CORTO00230 105 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 RGS5O15539 181 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 ST8SIA3O43173 380 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 CDS2O95674 445 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 CD5P06127 495 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 AKR1C2P52895 323 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 PPP5CP53041 499 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 BSXQ3C1V8 233 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 MISP3Q96FF7 219 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 C20orf24Q9BUV8 137 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 TMEM222Q9H0R3 208 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 SELENOKQ9Y6D0 94 aa12.71□□□□□ -0.37
MAP1LC3B-208ENST00000570189 KIR2DL5BA0A0G2JN68 375 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 KIR2DL5BA0A0G2JPC4 375 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 CHEK1O14757 476 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 ODF3L2Q3SX64 289 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 ZFAND6Q6FIF0 208 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 Q6ZWC4 215 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 KIR2DL5AQ8N109 375 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SLC35G3Q8N808 338 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 OR52E5Q8NH55 327 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 KIR2DL5BQ8NHK3 375 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 MARCH1Q8TCQ1 289 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 OVOL2Q9BRP0 275 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 DNAH1Q9P2D7 4330 aa12.7□□□□□ -0.38
MAP1LC3B-208ENST00000570189 UBE2CO00762 179 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 GSTZ1O43708 216 aaPredicted RBP12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 GNG7O60262 68 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 AKAIN1P0CW23 69 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 RNASE2P10153 161 aaKnown RBP12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SNCAP37840 140 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 RPL5P46777 297 aaKnown RBP12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 NPBWR1P48145 328 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SUB1P53999 127 aaKnown RBP eCLIP12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 IZUMO4Q1ZYL8 232 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 TRIM16LQ309B1 348 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SCGB2B2Q4G0G5 96 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 CLVS1Q8IUQ0 354 aaPredicted RBP12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 TMEM116Q8NCL8 245 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 DUSP18Q8NEJ0 188 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 GLYATL2Q8WU03 294 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 RRNAD1Q96FB5 475 aaKnown RBP12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 PRRT1Q99946 306 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 RTBDNQ9BSG5 229 aaPredicted RBP12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 PDCD10Q9BUL8 212 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 GPR132Q9UNW8 380 aa12.69□□□□□ -0.38
MAP1LC3B-208ENST00000570189 A0A0G2JRQ6 117 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 DISC1C4P0D8 188 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 IFNA17P01571 189 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 APOC4P55056 127 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 CMC4P56277 68 aaPredicted RBP12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 DHODHQ02127 395 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SP6Q3SY56 376 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 FAM90A2PQ658T7 463 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 DIRAS2Q96HU8 199 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 RNF2Q99496 336 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 RHPN1-AS1Q9BWJ2 59 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 VSIRQ9H7M9 311 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 NAA60Q9H7X0 242 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 CACFD1Q9UGQ2 172 aa12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 C14orf166Q9Y224 244 aaKnown RBP12.68□□□□□ -0.38
MAP1LC3B-208ENST00000570189 TRAV14DV4A0A0A6YYC5 116 aa12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 TEX13DA0A0J9YY54 714 aaPredicted RBP12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 CRYM-AS1A6NIL9 109 aa12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 OR5AC1P0C628 307 aa12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 ATF4P18848 351 aaPredicted RBP12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 BMI1P35226 326 aa12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SPCS3P61009 180 aa12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 IL18Q14116 193 aa12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 ZNF600Q6ZNG1 722 aa12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 RBPMSQ93062 196 aaKnown RBP12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 PINX1Q96BK5 328 aaKnown RBP12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 GALNT14Q96FL9 552 aa12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SOSTQ9BQB4 213 aa12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SLIRPQ9GZT3 109 aaKnown RBP12.67□□□□□ -0.38
MAP1LC3B-208ENST00000570189 ZFAND3Q9H8U3 227 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms