RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CXorf58Q96LI9 332 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 SDHCQ99643 169 aaPredicted RBP6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 C20orf24Q9BUV8 137 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 FAM212BQ9NTI7 297 aaPredicted RBP6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 THYN1Q9P016 225 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 NDUFA13Q9P0J0 144 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 FLVCR2Q9UPI3 526 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 IGHV3-49A0A0A0MS15 119 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 CYB5BO43169 146 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 TGOLN2O43493 480 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 YIF1AO95070 293 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 MT-CO2P00403 227 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 HOXB5P09067 269 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 INSL3P51460 131 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 SUPT4H1P63272 117 aaKnown RBP6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 CNPY1Q3B7I2 92 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 FAM106AQ4KMX7 169 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 UNQ9165/PRO28630Q6UXU0 137 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 ADAMTSL5Q6ZMM2 481 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 HSD17B13Q7Z5P4 300 aaPredicted RBP6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 FAM219AQ8IW50 185 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 SRSF8Q9BRL6 282 aaKnown RBP6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 CHRDL1Q9BU40 450 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 HEYLQ9NQ87 328 aaPredicted RBP6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 SLC2A8Q9NY64 477 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 C21orf62Q9NYP8 219 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 PEMTQ9UBM1 199 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 DNAH3Q8TD57 4116 aa6.86□□□□□ -1.31
GTF3C1-210ENST00000569394 IGHV3OR16-13A0A075B7E8 117 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 TRBV7-1A0A0A6YYK4 115 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 IGHV3-74A0A0B4J1X5 117 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 C2orf70A6NJV1 201 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 K7EIM0 57 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 IGLV1-51P01701 117 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 P0C879 139 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 ANXA3P12429 323 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 IL7P13232 177 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 FOLR2P14207 255 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 ANXA7P20073 488 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 PPP1R1AQ13522 171 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 CD300EQ496F6 205 aaPredicted RBP6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 THOC7Q6I9Y2 204 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 UXS1Q8NBZ7 420 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 OR1S1Q8NH92 325 aa6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 ZMAT5Q9UDW3 170 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 PAIP2BQ9ULR5 123 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-210ENST00000569394 IGKV3-7A0A075B6H7 116 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 TRAV6A0A075B6T7 132 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 SULT1A3P0DMM9 295 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 SULT1A4P0DMN0 295 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 RNASE2P10153 161 aaKnown RBP6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 CBLN1P23435 193 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 OPRK1P41145 380 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 UBE2MP61081 183 aaKnown RBP6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 ANKRD55Q3KP44 614 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 FAM209BQ5JX69 171 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 BTNL8Q6UX41 500 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 LGI3Q8N145 548 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 CENPSQ8N2Z9 138 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 OR1P1Q8NH06 330 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 VN1R17PQ8TDU5 208 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 LSM4Q9Y4Z0 139 aaKnown RBP6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 SMAD5-AS1Q9Y6J3 95 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 TMEM56-RWDD3S4R434 201 aa6.84□□□□□ -1.31
GTF3C1-210ENST00000569394 SORL1Q92673 2214 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 hCG_2014768A0A024R1R8 64 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 IGHV3-66A0A0C4DH42 116 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 TMEM213A2RRL7 107 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 CENPXA8MT69 81 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 F8W735 103 aaPredicted RBP6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 I3L2K1 104 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 RGS13O14921 159 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 GNG7O60262 68 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 B3GALNT1O75752 331 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 SFT2D2O95562 160 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 IAPPP10997 89 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 ADMP35318 185 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 SUB1P53999 127 aaKnown RBP eCLIP6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 MFAP4P55083 255 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 CD81P60033 236 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 SPCS3P61009 180 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 RBMS2Q15434 407 aaKnown RBP6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 C4orf46Q504U0 113 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 TMEM128Q5BJH2 165 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 GPHB5Q86YW7 130 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 OR52B4Q8NGK2 314 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 GALNT14Q96FL9 552 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 MAGT1Q9H0U3 335 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 WFDC10AQ9H1F0 79 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 RBKSQ9H477 322 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 MRPL36Q9P0J6 103 aaKnown RBP6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 MLXQ9UH92 298 aa6.83□□□□□ -1.32
GTF3C1-210ENST00000569394 NUPL2O15504 423 aaKnown RBP6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 ADAP1O75689 374 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 NDUFB6O95139 128 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 IFNA10P01566 189 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 CTSGP08311 255 aa6.82□□□□□ -1.32
GTF3C1-210ENST00000569394 CD7P09564 240 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms