RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 UFC1Q9Y3C8 167 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 BIRC6Q9NR09 4857 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 IGHV3OR16-8A0A075B7F1 116 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 TRAV25A0A0B4J276 109 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 C15orf62A8K5M9 175 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 K7EMT4 169 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 TSPAN4O14817 238 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 GSTZ1O43708 216 aaPredicted RBP5.83□□□□□ -1.48
CDH3-209ENST00000569080 MT-CO2P00403 227 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 IGHV3-48P01763 117 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 RNASE2P10153 161 aaKnown RBP5.83□□□□□ -1.48
CDH3-209ENST00000569080 AKR1C2P52895 323 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 SURF2Q15527 256 aaPredicted RBP5.83□□□□□ -1.48
CDH3-209ENST00000569080 BSXQ3C1V8 233 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 ODF3L2Q3SX64 289 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 SCGB2B2Q4G0G5 96 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 SPINK9Q5DT21 86 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 Q6ZRM9 215 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 ISOC1Q96CN7 298 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 SPAG8Q99932 426 aaPredicted RBP5.83□□□□□ -1.48
CDH3-209ENST00000569080 FAM110AQ9BQ89 295 aa5.83□□□□□ -1.48
CDH3-209ENST00000569080 NXF2Q9GZY0 626 aaKnown RBP5.83□□□□□ -1.48
CDH3-209ENST00000569080 ANKRD20A5PA0PJZ0 165 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 CRYM-AS1A6NIL9 109 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 ZNF207O43670 478 aaKnown RBP5.82□□□□□ -1.48
CDH3-209ENST00000569080 B3GALNT1O75752 331 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 CDS2O95674 445 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 OR5AC1P0C628 307 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 AKAIN1P0CW23 69 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 RPL5P46777 297 aaKnown RBP5.82□□□□□ -1.48
CDH3-209ENST00000569080 IL18Q14116 193 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 MEF2DQ14814 521 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 Q56UQ5 140 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 SLC16A13Q7RTY0 426 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 CCDC71LQ8N9Z2 235 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 UBAC2Q8NBM4 344 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 OR52B4Q8NGK2 314 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 ZFAND1Q8TCF1 268 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 GLYATL2Q8WU03 294 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 TRIM63Q969Q1 353 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 TMEM230Q96A57 120 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 MISP3Q96FF7 219 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 DIRAS2Q96HU8 199 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 TXN2Q99757 166 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 C6orf62Q9GZU0 229 aaPredicted RBP5.82□□□□□ -1.48
CDH3-209ENST00000569080 TMEM222Q9H0R3 208 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 RBM38Q9H0Z9 239 aaKnown RBP5.82□□□□□ -1.48
CDH3-209ENST00000569080 FNDC4Q9H6D8 234 aaPredicted RBP5.82□□□□□ -1.48
CDH3-209ENST00000569080 NAA60Q9H7X0 242 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 ZFAND3Q9H8U3 227 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 MRPL36Q9P0J6 103 aaKnown RBP5.82□□□□□ -1.48
CDH3-209ENST00000569080 COPZ2Q9P299 210 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 GPR132Q9UNW8 380 aa5.82□□□□□ -1.48
CDH3-209ENST00000569080 IGHV7-4-1A0A0J9YVY3 117 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 CHEK1O14757 476 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 NUPL2O15504 423 aaKnown RBP5.81□□□□□ -1.48
CDH3-209ENST00000569080 LYL1P12980 280 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 MFAP4P55083 255 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 RELQ04864 619 aaPredicted RBP5.81□□□□□ -1.48
CDH3-209ENST00000569080 TRIM16LQ309B1 348 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 FAM90A2PQ658T7 463 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 ZFAND6Q6FIF0 208 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 SLC35G3Q8N808 338 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 OR51S1Q8NGJ8 323 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 RBPMSQ93062 196 aaKnown RBP5.81□□□□□ -1.48
CDH3-209ENST00000569080 RNF2Q99496 336 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 C20orf24Q9BUV8 137 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 GGTLC1Q9BX51 225 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 GAR1Q9NY12 217 aaKnown RBP5.81□□□□□ -1.48
CDH3-209ENST00000569080 RABL2AQ9UBK7 228 aaPredicted RBP5.81□□□□□ -1.48
CDH3-209ENST00000569080 SMPXQ9UHP9 88 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 RABL2BQ9UNT1 228 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 V9GYH0 126 aa5.81□□□□□ -1.48
CDH3-209ENST00000569080 TEX13DA0A0J9YY54 714 aaPredicted RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 DISC1C4P0D8 188 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 ATG12O94817 140 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 TNFSF8P32971 234 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 ETV6P41212 452 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 SUPT4H1P63272 117 aaKnown RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 ERHP84090 104 aaKnown RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 KLF9Q13886 244 aaPredicted RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 ZNF79Q15937 498 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 ANKRD55Q3KP44 614 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 TOMM20LQ6UXN7 152 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 RBPMS2Q6ZRY4 209 aaKnown RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 FAM219AQ8IW50 185 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 SELENOHQ8IZQ5 122 aaKnown RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 OR52E5Q8NH55 327 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 TMEM170AQ8WVE7 144 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 PINX1Q96BK5 328 aaKnown RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 RRNAD1Q96FB5 475 aaKnown RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 GALNT14Q96FL9 552 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 PRRT1Q99946 306 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 VSIRQ9H7M9 311 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 PRR13Q9NZ81 148 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 CACNG5Q9UF02 275 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 RSL24D1Q9UHA3 163 aaKnown RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 UBQLN2Q9UHD9 624 aa5.8□□□□□ -1.48
CDH3-209ENST00000569080 C14orf166Q9Y224 244 aaKnown RBP5.8□□□□□ -1.48
CDH3-209ENST00000569080 TMEM56-RWDD3S4R434 201 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms