RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 FAM168AQ92567 244 aa14.92□□□□□ -0.02
PKD1-235ENST00000568591 PLXNB1O43157 2135 aa14.92□□□□□ -0.02
PKD1-235ENST00000568591 UPK2O00526 184 aa14.92□□□□□ -0.02
PKD1-235ENST00000568591 REG1BP48304 166 aa14.92□□□□□ -0.02
PKD1-235ENST00000568591 DEFB109BQ30KR1 87 aa14.92□□□□□ -0.02
PKD1-235ENST00000568591 STUMQ69YW2 141 aa14.92□□□□□ -0.02
PKD1-235ENST00000568591 ZCCHC24Q8N2G6 241 aaKnown RBP14.92□□□□□ -0.02
PKD1-235ENST00000568591 CHODLQ9H9P2 273 aa14.92□□□□□ -0.02
PKD1-235ENST00000568591 SLC35D1Q9NTN3 355 aa14.92□□□□□ -0.02
PKD1-235ENST00000568591 IL19Q9UHD0 177 aa14.92□□□□□ -0.02
PKD1-235ENST00000568591 SPAARA0A1B0GVQ0 90 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 ESDP10768 282 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 KRTDAPP60985 99 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 MAJINQ3KP22 176 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 SFXN3Q9BWM7 321 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 SSBP3Q9BWW4 388 aaPredicted RBP14.91□□□□□ -0.02
PKD1-235ENST00000568591 BSNQ9UPA5 3926 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 PAFAH1B2P68402 229 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 IGFL2Q6UWQ7 119 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 TMEM136Q6ZRR5 245 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 SERTAD4Q9NUC0 356 aa14.91□□□□□ -0.02
PKD1-235ENST00000568591 GLRXP35754 106 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 CX3CL1P78423 397 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 LHFPL4Q7Z7J7 247 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 TECRQ9NZ01 308 aaKnown RBP14.9□□□□□ -0.02
PKD1-235ENST00000568591 SLC25A10Q9UBX3 287 aaPredicted RBP14.9□□□□□ -0.02
PKD1-235ENST00000568591 PRNDQ9UKY0 176 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 PKDREJQ9NTG1 2253 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 IGHV1-46P01743 117 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 RNASE2P10153 161 aaKnown RBP14.9□□□□□ -0.02
PKD1-235ENST00000568591 C10orf55Q5SWW7 151 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 Q8N976 141 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 RNF7Q9UBF6 113 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 LY96Q9Y6Y9 160 aa14.9□□□□□ -0.02
PKD1-235ENST00000568591 TRAV9-1A0A075B6T8 112 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 PYYP10082 97 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 ZNF25P17030 456 aaPredicted RBP14.89□□□□□ -0.03
PKD1-235ENST00000568591 PMCHP20382 165 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 CHRNB4P30926 498 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 RANP62826 216 aaKnown RBP14.89□□□□□ -0.03
PKD1-235ENST00000568591 TNFAIP6P98066 277 aaPredicted RBP14.89□□□□□ -0.03
PKD1-235ENST00000568591 Q0VG73 95 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 DIAPH2-AS1Q14236 149 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 BATFQ16520 125 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 POU2AF1Q16633 256 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 FAM222BQ8WU58 562 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 GNB1LQ9BYB4 327 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 NCOR1P1Q9H4R4 102 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 TMEM167BQ9NRX6 74 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 TBL2Q9Y4P3 447 aaKnown RBP14.89□□□□□ -0.03
PKD1-235ENST00000568591 FAM215AQ9Y5M1 114 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 GVINP1Q7Z2Y8 2422 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 ITGB1BP1O14713 200 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 GPX1P07203 203 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.89□□□□□ -0.03
PKD1-235ENST00000568591 IGF2BP2-AS1Q96M15 143 aa14.89□□□□□ -0.03
PKD1-235ENST00000568591 MRPL20Q9BYC9 149 aaKnown RBP14.89□□□□□ -0.03
PKD1-235ENST00000568591 OR5G3P0C626 314 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 CCL3L1P16619 93 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 SRIP30626 198 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 FAM27E3Q08E93 113 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 TIGITQ495A1 244 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 SLC25A48Q6ZT89 311 aaKnown RBP14.88□□□□□ -0.03
PKD1-235ENST00000568591 FAM19A2Q8N3H0 131 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 DEFB124Q8NES8 71 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 SLC25A33Q9BSK2 321 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 ASCL3Q9NQ33 180 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 IGLV3-9A0A075B6K5 115 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 TRAV34A0A0B4J273 112 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 BMPR1BO00238 502 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 CCL8P80075 99 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 IBA57Q5T440 356 aaKnown RBP14.88□□□□□ -0.03
PKD1-235ENST00000568591 SIGLECL1Q8N7X8 197 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 FAM167A-AS1Q96KT0 104 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 VAMP8Q9BV40 100 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 SLC25A2Q9BXI2 301 aa14.88□□□□□ -0.03
PKD1-235ENST00000568591 RPUSD1Q9UJJ7 312 aaKnown RBP14.88□□□□□ -0.03
PKD1-235ENST00000568591 CSMD1Q96PZ7 3565 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 MBD3L4A6NDZ8 208 aaPredicted RBP14.87□□□□□ -0.03
PKD1-235ENST00000568591 MBD3L3A6NE82 208 aaPredicted RBP14.87□□□□□ -0.03
PKD1-235ENST00000568591 MBD3L5A6NJ08 208 aaPredicted RBP14.87□□□□□ -0.03
PKD1-235ENST00000568591 FCN3O75636 299 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 AMTP48728 403 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 MBD3L2Q8NHZ7 208 aaPredicted RBP14.87□□□□□ -0.03
PKD1-235ENST00000568591 LOXL4Q96JB6 756 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 C20orf144Q9BQM9 153 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 MIEN1Q9BRT3 115 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 OTOGLQ3ZCN5 2332 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 A0A1W2PS18 150 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 PLAUP00749 431 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 TIMM23BQ5SRD1 257 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 ZNF788Q6ZQV5 615 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 CORO2AQ92828 525 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 ADTRPQ96IZ2 230 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 SGK494Q96LW2 274 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 ZNF257Q9Y2Q1 563 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 DYSFO75923 2080 aa14.87□□□□□ -0.03
PKD1-235ENST00000568591 AKAP13Q12802 2813 aa14.86□□□□□ -0.03
PKD1-235ENST00000568591 RTL8BQ17RB0 113 aa14.86□□□□□ -0.03
PKD1-235ENST00000568591 RUSC1-AS1Q66K80 236 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms