RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MBP02144 154 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 CRYGBP07316 175 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 ADCYAP1P18509 176 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 COMPP49747 757 aaPredicted RBP5.65□□□□□ -1.51
SMG1-215ENST00000568239 ACOT6Q3I5F7 207 aaPredicted RBP5.65□□□□□ -1.51
SMG1-215ENST00000568239 AKIRIN2Q53H80 203 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 HIST2H2BCQ6DN03 193 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 MRPL41Q8IXM3 137 aaKnown RBP5.65□□□□□ -1.51
SMG1-215ENST00000568239 COMMD1Q8N668 190 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 OR2T6Q8NHC8 308 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 RNF5Q99942 180 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 MAP1LC3BQ9GZQ8 125 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 C7orf69Q9H7B7 122 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 PXMP4Q9Y6I8 212 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 TENM4Q6N022 2769 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 A0A1W2PPV4 95 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 RBFOX3A6NFN3 312 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 NPFFO15130 113 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 CD5P06127 495 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 M6PRP20645 277 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 B2MP61769 119 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 CD69Q07108 199 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 GAMTQ14353 236 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 MALSU1Q96EH3 234 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 SLC35E1Q96K37 410 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 GGTLC1Q9BX51 225 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 TBL2Q9Y4P3 447 aaKnown RBP5.64□□□□□ -1.51
SMG1-215ENST00000568239 NBPF19A0A087WUL8 3843 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 IGLC7A0M8Q6 106 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 J3QKU1 62 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 CYB5BO43169 146 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 MSMBP08118 114 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 FAM106CPP0CH98 169 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 MDKP21741 143 aaPredicted RBP5.64□□□□□ -1.51
SMG1-215ENST00000568239 GATA2P23769 480 aaPredicted RBP5.64□□□□□ -1.51
SMG1-215ENST00000568239 BRS3P32247 399 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 FXYD3Q14802 87 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 FAM120AOSQ5T036 256 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 SLC16A13Q7RTY0 426 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 CENPVQ7Z7K6 275 aaPredicted RBP5.64□□□□□ -1.51
SMG1-215ENST00000568239 SUN5Q8TC36 379 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 RXFP4Q8TDU9 374 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 ACTR3CQ9C0K3 210 aaPredicted RBP5.64□□□□□ -1.51
SMG1-215ENST00000568239 HIF1ANQ9NWT6 349 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 TLN2Q9Y4G6 2542 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 BTBD17A6NE02 478 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 OOSP1A8MZH6 123 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 PLA2G2AP14555 144 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 OR10J1P30954 320 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 MAS1LP35410 378 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 CDC34P49427 236 aaPredicted RBP5.64□□□□□ -1.51
SMG1-215ENST00000568239 ATP5IP56385 69 aaPredicted RBP5.64□□□□□ -1.51
SMG1-215ENST00000568239 DSCR9P59020 149 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 PAX8Q06710 450 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 GUCA2BQ16661 112 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 BSXQ3C1V8 233 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 ANKRD39Q53RE8 183 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 STPG3Q8N7X2 389 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 RAB24Q969Q5 203 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 TMPRSS5Q9H3S3 457 aa5.64□□□□□ -1.51
SMG1-215ENST00000568239 LSM4Q9Y4Z0 139 aaKnown RBP5.64□□□□□ -1.51
SMG1-215ENST00000568239 ZANQ9Y493 2812 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 CTXND1A0A1B0GTU2 59 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 B4DSR2 109 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 FBP1P09467 338 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 HABP2Q14520 560 aaPredicted RBP5.63□□□□□ -1.51
SMG1-215ENST00000568239 C5orf64Q2M2E5 130 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 ATRAIDQ6UW56 229 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 TMEM144Q7Z5S9 345 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 NPIPB3Q92617 1050 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 C1orf159Q96HA4 380 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 FNDC4Q9H6D8 234 aaPredicted RBP5.63□□□□□ -1.51
SMG1-215ENST00000568239 PRRC2AP48634 2157 aaKnown RBP5.63□□□□□ -1.51
SMG1-215ENST00000568239 IGKV1OR2-108A0A075B7D4 117 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 NUPL2O15504 423 aaKnown RBP5.63□□□□□ -1.51
SMG1-215ENST00000568239 IGHV4-38-2P0DP08 117 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 BTN1A1Q13410 526 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 SVBPQ8N300 66 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 RNASEH2CQ8TDP1 164 aaKnown RBP5.63□□□□□ -1.51
SMG1-215ENST00000568239 MBD3L1Q8WWY6 194 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 SLC25A33Q9BSK2 321 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 SEC11CQ9BY50 192 aa5.63□□□□□ -1.51
SMG1-215ENST00000568239 POLR3KQ9Y2Y1 108 aaPredicted RBP5.63□□□□□ -1.51
SMG1-215ENST00000568239 APCP25054 2843 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 IGHV1-69DA0A0B4J2H0 117 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 TEX22C9J3V5 150 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 RNF223E7ERA6 249 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 INS-IGF2F8WCM5 200 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 YIF1AO95070 293 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 NDUFA3O95167 84 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 IGHV1-69P01742 117 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 SLC25A16P16260 332 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 RND2P52198 227 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 CX3CL1P78423 397 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 SSBP2P81877 361 aaPredicted RBP5.62□□□□□ -1.51
SMG1-215ENST00000568239 NPBQ8NG41 125 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 CACNG8Q8WXS5 425 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 WNT10AQ9GZT5 417 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 SLC35B3Q9H1N7 401 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 KCNIP2Q9NS61 270 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms