RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 TMED4Q7Z7H5 227 aa19.03■□□□□ 0.64
FANCA-228ENST00000567943 BSCL2Q96G97 398 aaPredicted RBP19.03■□□□□ 0.64
FANCA-228ENST00000567943 WWC2-AS2Q96NR7 200 aa19.03■□□□□ 0.64
FANCA-228ENST00000567943 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.03■□□□□ 0.64
FANCA-228ENST00000567943 CACNG5Q9UF02 275 aa19.03■□□□□ 0.64
FANCA-228ENST00000567943 F8W735 103 aaPredicted RBP19.02■□□□□ 0.64
FANCA-228ENST00000567943 INS-IGF2F8WCM5 200 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 IGHV4-30-4P0DP06 118 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 SNCAP37840 140 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 INPP1P49441 399 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 BAK1Q16611 211 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 TRIQKQ629K1 86 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 UNQ9165/PRO28630Q6UXU0 137 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 CACNG8Q8WXS5 425 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 IL22RA2Q969J5 263 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 ATP6V0BQ99437 205 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 ENY2Q9NPA8 101 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 C19orf73Q9NVV2 129 aa19.02■□□□□ 0.64
FANCA-228ENST00000567943 TMEM213A2RRL7 107 aa19.01■□□□□ 0.63
FANCA-228ENST00000567943 A8MWP6 167 aa19.01■□□□□ 0.63
FANCA-228ENST00000567943 I3L2K1 104 aa19.01■□□□□ 0.63
FANCA-228ENST00000567943 MT-CO2P00403 227 aa19.01■□□□□ 0.63
FANCA-228ENST00000567943 CBLN1P23435 193 aa19.01■□□□□ 0.63
FANCA-228ENST00000567943 CD300EQ496F6 205 aaPredicted RBP19.01■□□□□ 0.63
FANCA-228ENST00000567943 SPSB3Q6PJ21 355 aa19.01■□□□□ 0.63
FANCA-228ENST00000567943 OR2K2Q8NGT1 345 aa19.01■□□□□ 0.63
FANCA-228ENST00000567943 PINX1Q96BK5 328 aaKnown RBP19.01■□□□□ 0.63
FANCA-228ENST00000567943 CHRDL1Q9BU40 450 aa19.01■□□□□ 0.63
FANCA-228ENST00000567943 ANXA3P12429 323 aa19■□□□□ 0.63
FANCA-228ENST00000567943 DEFB114Q30KQ6 69 aa19■□□□□ 0.63
FANCA-228ENST00000567943 AARDQ4LEZ3 155 aa19■□□□□ 0.63
FANCA-228ENST00000567943 TM4SF20Q53R12 229 aa19■□□□□ 0.63
FANCA-228ENST00000567943 SLC25A21Q9BQT8 299 aaPredicted RBP19■□□□□ 0.63
FANCA-228ENST00000567943 ZNF436Q9C0F3 470 aaPredicted RBP19■□□□□ 0.63
FANCA-228ENST00000567943 NBEAL2Q6ZNJ1 2754 aa19■□□□□ 0.63
FANCA-228ENST00000567943 A8MZ25 164 aa18.99■□□□□ 0.63
FANCA-228ENST00000567943 IGHV3-48P01763 117 aa18.99■□□□□ 0.63
FANCA-228ENST00000567943 SPCS3P61009 180 aa18.99■□□□□ 0.63
FANCA-228ENST00000567943 OR52E5Q8NH55 327 aa18.99■□□□□ 0.63
FANCA-228ENST00000567943 SDHCQ99643 169 aaPredicted RBP18.99■□□□□ 0.63
FANCA-228ENST00000567943 PALMDQ9NP74 551 aa18.99■□□□□ 0.63
FANCA-228ENST00000567943 SELENOKQ9Y6D0 94 aa18.99■□□□□ 0.63
FANCA-228ENST00000567943 ZNF785A8K8V0 405 aa18.98■□□□□ 0.63
FANCA-228ENST00000567943 RNASE2P10153 161 aaKnown RBP18.98■□□□□ 0.63
FANCA-228ENST00000567943 ADMP35318 185 aa18.98■□□□□ 0.63
FANCA-228ENST00000567943 SUB1P53999 127 aaKnown RBP eCLIP18.98■□□□□ 0.63
FANCA-228ENST00000567943 MFAP4P55083 255 aa18.98■□□□□ 0.63
FANCA-228ENST00000567943 TMEM128Q5BJH2 165 aa18.98■□□□□ 0.63
FANCA-228ENST00000567943 LYZL2Q7Z4W2 148 aa18.98■□□□□ 0.63
FANCA-228ENST00000567943 LGI3Q8N145 548 aa18.98■□□□□ 0.63
FANCA-228ENST00000567943 UXS1Q8NBZ7 420 aa18.98■□□□□ 0.63
FANCA-228ENST00000567943 GAR1Q9NY12 217 aaKnown RBP18.98■□□□□ 0.63
FANCA-228ENST00000567943 TECRQ9NZ01 308 aaKnown RBP18.98■□□□□ 0.63
FANCA-228ENST00000567943 UFC1Q9Y3C8 167 aa18.98■□□□□ 0.63
FANCA-228ENST00000567943 A0A0B4J2A0 478 aa18.97■□□□□ 0.63
FANCA-228ENST00000567943 LINC00854A0A1B0GVQ3 168 aa18.97■□□□□ 0.63
FANCA-228ENST00000567943 SRPXP78539 464 aa18.97■□□□□ 0.63
FANCA-228ENST00000567943 TMEM190Q8WZ59 177 aa18.97■□□□□ 0.63
FANCA-228ENST00000567943 SHPKQ9UHJ6 478 aa18.97■□□□□ 0.63
FANCA-228ENST00000567943 NDUFA4O00483 81 aa18.96■□□□□ 0.63
FANCA-228ENST00000567943 NXPH3O95157 252 aa18.96■□□□□ 0.63
FANCA-228ENST00000567943 CTSGP08311 255 aa18.96■□□□□ 0.63
FANCA-228ENST00000567943 SULT1A3P0DMM9 295 aa18.96■□□□□ 0.63
FANCA-228ENST00000567943 SULT1A4P0DMN0 295 aa18.96■□□□□ 0.63
FANCA-228ENST00000567943 FCGR2BP31994 310 aaPredicted RBP18.96■□□□□ 0.63
FANCA-228ENST00000567943 CCR6P51684 374 aa18.96■□□□□ 0.63
FANCA-228ENST00000567943 ELLP55199 621 aaPredicted RBP18.96■□□□□ 0.63
FANCA-228ENST00000567943 GTSCR1Q86UQ5 136 aa18.96■□□□□ 0.63
FANCA-228ENST00000567943 TXN2Q99757 166 aa18.96■□□□□ 0.63
FANCA-228ENST00000567943 MLXQ9UH92 298 aa18.96■□□□□ 0.63
FANCA-228ENST00000567943 NUPL2O15504 423 aaKnown RBP18.95■□□□□ 0.62
FANCA-228ENST00000567943 VAMP1P23763 118 aa18.95■□□□□ 0.62
FANCA-228ENST00000567943 RBMS2Q15434 407 aaKnown RBP18.95■□□□□ 0.62
FANCA-228ENST00000567943 NMSQ5H8A3 153 aa18.95■□□□□ 0.62
FANCA-228ENST00000567943 PVRIGQ6DKI7 326 aa18.95■□□□□ 0.62
FANCA-228ENST00000567943 MARC2Q969Z3 335 aa18.95■□□□□ 0.62
FANCA-228ENST00000567943 HEYLQ9NQ87 328 aaPredicted RBP18.95■□□□□ 0.62
FANCA-228ENST00000567943 NAP1L6A6NFF2 107 aa18.94■□□□□ 0.62
FANCA-228ENST00000567943 CEBPZOSA8MTT3 80 aa18.94■□□□□ 0.62
FANCA-228ENST00000567943 GUCA2BQ16661 112 aa18.94■□□□□ 0.62
FANCA-228ENST00000567943 BTNL8Q6UX41 500 aa18.94■□□□□ 0.62
FANCA-228ENST00000567943 CENPSQ8N2Z9 138 aa18.94■□□□□ 0.62
FANCA-228ENST00000567943 WDR89Q96FK6 387 aaPredicted RBP18.94■□□□□ 0.62
FANCA-228ENST00000567943 RCHY1Q96PM5 261 aa18.94■□□□□ 0.62
FANCA-228ENST00000567943 TM2D3Q9BRN9 247 aa18.94■□□□□ 0.62
FANCA-228ENST00000567943 C20orf24Q9BUV8 137 aa18.94■□□□□ 0.62
FANCA-228ENST00000567943 MRPL27Q9P0M9 148 aaKnown RBP18.94■□□□□ 0.62
FANCA-228ENST00000567943 IGHV3OR16-8A0A075B7F1 116 aa18.93■□□□□ 0.62
FANCA-228ENST00000567943 CORTO00230 105 aa18.93■□□□□ 0.62
FANCA-228ENST00000567943 GNG7O60262 68 aa18.93■□□□□ 0.62
FANCA-228ENST00000567943 C8orf88P0DMB2 117 aa18.93■□□□□ 0.62
FANCA-228ENST00000567943 IL7P13232 177 aa18.93■□□□□ 0.62
FANCA-228ENST00000567943 SMCO1Q147U7 214 aa18.93■□□□□ 0.62
FANCA-228ENST00000567943 BSXQ3C1V8 233 aa18.93■□□□□ 0.62
FANCA-228ENST00000567943 DUSP18Q8NEJ0 188 aa18.93■□□□□ 0.62
FANCA-228ENST00000567943 ZNF414Q96IQ9 312 aa18.93■□□□□ 0.62
FANCA-228ENST00000567943 DAZ1Q9NQZ3 744 aaKnown RBP18.93■□□□□ 0.62
FANCA-228ENST00000567943 HTR2BP41595 481 aa18.92■□□□□ 0.62
FANCA-228ENST00000567943 NPBWR1P48145 328 aa18.92■□□□□ 0.62
FANCA-228ENST00000567943 RELQ04864 619 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms