RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 WDR73Q6P4I2 378 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 ZNF596Q8TC21 504 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 AAMDCQ9H7C9 122 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 PTPRQQ9UMZ3 2332 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 A0A0G2JNJ9 132 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.55□□□□□ -0.88
CDH1-210ENST00000566612 UBE2CO00762 179 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 PRB4P10163 310 aaPredicted RBP9.55□□□□□ -0.88
CDH1-210ENST00000566612 CCKARP32238 428 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 RELBQ01201 579 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 NOL4LQ96MY1 436 aaPredicted RBP9.55□□□□□ -0.88
CDH1-210ENST00000566612 Q9UFV3 132 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 ARFGEF3Q5TH69 2177 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 TMSB15BA0A087X1C1 80 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 ZNF785A8K8V0 405 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 FOLR2P14207 255 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 SELENOTP62341 195 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 HSPB9Q9BQS6 159 aa9.55□□□□□ -0.88
CDH1-210ENST00000566612 C20orf202A1L168 122 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 K7EM74 188 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 NDUFA2O43678 99 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 GFRA3O60609 400 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 P01737 135 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 PAX6P26367 422 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 SPACA3Q8IXA5 215 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 C11orf53Q8IXP5 236 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 OCC1Q8TAD7 63 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 NEUROG1Q92886 237 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 RNASE6Q93091 150 aaKnown RBP9.54□□□□□ -0.88
CDH1-210ENST00000566612 DPRXA6NFQ7 191 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 ZNF134P52741 427 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 SSX7Q7RTT5 188 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 TBX15Q96SF7 602 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 MGST2Q99735 147 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 B9A039 149 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 LINC00305Q7Z4B0 112 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 TMEM144Q7Z5S9 345 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 CLEC7AQ9BXN2 247 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 ARL2-SNX15V9GYD0 113 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 TEX50A0A1B0GTY4 177 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 FOXH1O75593 365 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 PRNTQ86SH4 94 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 STXBP6Q8NFX7 210 aa9.54□□□□□ -0.88
CDH1-210ENST00000566612 G0S2P27469 103 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 GPR6P46095 362 aaPredicted RBP9.53□□□□□ -0.88
CDH1-210ENST00000566612 PKIAP61925 76 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 MEF2CQ06413 473 aaPredicted RBP9.53□□□□□ -0.88
CDH1-210ENST00000566612 PRR30Q53SZ7 412 aaPredicted RBP9.53□□□□□ -0.88
CDH1-210ENST00000566612 SPRNQ5BIV9 151 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 C1QL4Q86Z23 238 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 RNASE7Q9H1E1 156 aaKnown RBP9.53□□□□□ -0.88
CDH1-210ENST00000566612 HIGD1AQ9Y241 93 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 APCSP02743 223 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 HTR1DP28221 377 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 TMEM200BQ69YZ2 307 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 TMEM183AQ8IXX5 376 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 GAFA1Q96PS6 74 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 THYN1Q9P016 225 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 FAM215AQ9Y5M1 114 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 TRAV5A0A0B4J249 113 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 CLEC3BP05452 202 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 PYYP10082 97 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 LGALS7P47929 136 aa9.53□□□□□ -0.88
CDH1-210ENST00000566612 EAF1Q96JC9 268 aaPredicted RBP9.53□□□□□ -0.88
CDH1-210ENST00000566612 SOD3P08294 240 aa9.52□□□□□ -0.88
CDH1-210ENST00000566612 DLX1P56177 255 aa9.52□□□□□ -0.88
CDH1-210ENST00000566612 ADIPOQQ15848 244 aa9.52□□□□□ -0.88
CDH1-210ENST00000566612 LYPD2Q6UXB3 125 aa9.52□□□□□ -0.88
CDH1-210ENST00000566612 AP1S3Q96PC3 154 aa9.52□□□□□ -0.88
CDH1-210ENST00000566612 MMP23AO75900 390 aa9.52□□□□□ -0.89
CDH1-210ENST00000566612 HIST1H1EP10412 219 aaKnown RBP9.52□□□□□ -0.89
CDH1-210ENST00000566612 TMPRSS3P57727 454 aa9.52□□□□□ -0.89
CDH1-210ENST00000566612 PRCDQ00LT1 54 aa9.52□□□□□ -0.89
CDH1-210ENST00000566612 ECSCRQ19T08 205 aa9.52□□□□□ -0.89
CDH1-210ENST00000566612 LEMD1Q68G75 181 aa9.52□□□□□ -0.89
CDH1-210ENST00000566612 LY6HO94772 140 aa9.52□□□□□ -0.89
CDH1-210ENST00000566612 PPOXP50336 477 aa9.52□□□□□ -0.89
CDH1-210ENST00000566612 PIP4P1Q86T03 277 aa9.52□□□□□ -0.89
CDH1-210ENST00000566612 STAG3L2P0CL84 134 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 STAG3L3P0CL85 134 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 S100A7P31151 101 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 PLA2G5P39877 138 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 TMEM30BQ3MIR4 351 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 ZNF788Q6ZQV5 615 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 SSX8Q7RTT4 187 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 OR52E5Q8NH55 327 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 PPP1R14DQ9NXH3 145 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 DKK4Q9UBT3 224 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 REV3LO60673 3130 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 ANKRD11Q6UB99 2663 aaPredicted RBP9.51□□□□□ -0.89
CDH1-210ENST00000566612 C15orf65H3BRN8 121 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 M0R2Z0 102 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 IGLV1-44P01699 117 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 SRIP30626 198 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 FCGR2BP31994 310 aaPredicted RBP9.51□□□□□ -0.89
CDH1-210ENST00000566612 LINC01551Q86U37 167 aa9.51□□□□□ -0.89
CDH1-210ENST00000566612 IGHV3OR16-8A0A075B7F1 116 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 CD69Q07108 199 aa9.5□□□□□ -0.89
CDH1-210ENST00000566612 RBM14Q96PK6 669 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms