RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 OR2T6Q8NHC8 308 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 SFXN3Q9BWM7 321 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 COMMD5Q9GZQ3 224 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 GNB4Q9HAV0 340 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 MBD3L4A6NDZ8 208 aaPredicted RBP11.61□□□□□ -0.55
CDH1-209ENST00000566510 MBD3L3A6NE82 208 aaPredicted RBP11.61□□□□□ -0.55
CDH1-209ENST00000566510 MBD3L5A6NJ08 208 aaPredicted RBP11.61□□□□□ -0.55
CDH1-209ENST00000566510 CA1P00915 261 aaPredicted RBP11.61□□□□□ -0.55
CDH1-209ENST00000566510 IBA57Q5T440 356 aaKnown RBP11.61□□□□□ -0.55
CDH1-209ENST00000566510 TPTE2P1Q5T6R2 138 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 MBD3L2Q8NHZ7 208 aaPredicted RBP11.61□□□□□ -0.55
CDH1-209ENST00000566510 GNB1LQ9BYB4 327 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 ZNF257Q9Y2Q1 563 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 FTH1P19P0C7X4 201 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 CHRNB4P30926 498 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 BATFQ16520 125 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 ZADH2Q8N4Q0 377 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 LINC00479Q96M42 142 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 HARBI1Q96MB7 349 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 VAMP8Q9BV40 100 aa11.61□□□□□ -0.55
CDH1-209ENST00000566510 ADGRG4Q8IZF6 3080 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 PMCHP20382 165 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 TNFSF4P23510 183 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 FAM27E3Q08E93 113 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 TMEM183BQ1AE95 376 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 SLC25A48Q6ZT89 311 aaKnown RBP11.6□□□□□ -0.55
CDH1-209ENST00000566510 C22orf34Q6ZV56 151 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 ZCCHC24Q8N2G6 241 aaKnown RBP11.6□□□□□ -0.55
CDH1-209ENST00000566510 SLC35E1Q96K37 410 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 RPUSD1Q9UJJ7 312 aaKnown RBP11.6□□□□□ -0.55
CDH1-209ENST00000566510 IGLV3-9A0A075B6K5 115 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 C8orf88P0DMB2 117 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 UBE2L3P68036 154 aaKnown RBP11.6□□□□□ -0.55
CDH1-209ENST00000566510 CX3CL1P78423 397 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 POU2AF1Q16633 256 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 MORN5Q5VZ52 161 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 FAM222BQ8WU58 562 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 NEU1Q99519 415 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 ASCL3Q9NQ33 180 aa11.6□□□□□ -0.55
CDH1-209ENST00000566510 FNDC10F2Z333 226 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 ZNF253O75346 499 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 RNASE2P10153 161 aaKnown RBP11.59□□□□□ -0.55
CDH1-209ENST00000566510 BRS3P32247 399 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 AMTP48728 403 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 ZNF124Q15973 351 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 SLC25A33Q9BSK2 321 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 SSBP3Q9BWW4 388 aaPredicted RBP11.59□□□□□ -0.55
CDH1-209ENST00000566510 MRPL20Q9BYC9 149 aaKnown RBP11.59□□□□□ -0.55
CDH1-209ENST00000566510 hADV38S2A0JD32 116 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 RAB4AP20338 218 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 TDGF1P3P51864 188 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 Q0VG73 95 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 C2orf83Q53S99 150 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 TBL2Q9Y4P3 447 aaKnown RBP11.59□□□□□ -0.55
CDH1-209ENST00000566510 FAM215AQ9Y5M1 114 aa11.59□□□□□ -0.55
CDH1-209ENST00000566510 TRBV9A0A0B4J1U6 114 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 APOA2P02652 100 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 OR5G3P0C626 314 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 CCL3L1P16619 93 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 SRIP30626 198 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 GATA4P43694 442 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 ERHP84090 104 aaKnown RBP11.58□□□□□ -0.56
CDH1-209ENST00000566510 CD69Q07108 199 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 WDR73Q6P4I2 378 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 ZNF788Q6ZQV5 615 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 OR5B3Q8NH48 314 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 RCHY1Q96PM5 261 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 NCOR1P1Q9H4R4 102 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 OTOGLQ3ZCN5 2332 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 KALRNO60229 2985 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 PYYP10082 97 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 ZNF25P17030 456 aaPredicted RBP11.58□□□□□ -0.56
CDH1-209ENST00000566510 SSBP2P81877 361 aaPredicted RBP11.58□□□□□ -0.56
CDH1-209ENST00000566510 TEX43Q6ZNM6 134 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 TMEM136Q6ZRR5 245 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 ZNF586Q9NXT0 402 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 FBXL7Q9UJT9 491 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 ABCA1O95477 2261 aa11.58□□□□□ -0.56
CDH1-209ENST00000566510 TPRP12270 2363 aaKnown RBP11.58□□□□□ -0.56
CDH1-209ENST00000566510 E7EUB6 86 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 MT-ND6P03923 174 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 GPX1P07203 203 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 ESDP10768 282 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 PPOXP50336 477 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 CASP6P55212 293 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 RPL8P62917 257 aaKnown RBP11.57□□□□□ -0.56
CDH1-209ENST00000566510 H1FXQ92522 213 aaKnown RBP11.57□□□□□ -0.56
CDH1-209ENST00000566510 MIEN1Q9BRT3 115 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 DNAJC4Q9NNZ3 241 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 BET1LQ9NYM9 111 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 RNF114Q9Y508 228 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 ARL2-SNX15V9GYD0 113 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 TRAV34A0A0B4J273 112 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 A0A1W2PRE2 83 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 DIRC3C9JPN6 131 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 ISLRO14498 428 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 TM4SF5O14894 197 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 COX7A2P2O60397 106 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 PRR27Q6MZM9 219 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms